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Bacterial genomics

Predicting Statistical Properties of Open Reading Frames in Bacterial Genomes

Katharina Mir, Klaus Neuhaus, [ ... ], Steffen Schober

Genes Encoding Cher-TPR Fusion Proteins Are Predominantly Found in Gene Clusters Encoding Chemosensory Pathways with Alternative Cellular Functions

Francisco Muñoz-Martínez, Cristina García-Fontana, [ ... ], Tino Krell

Bifidobacterium asteroides PRL2011 Genome Analysis Reveals Clues for Colonization of the Insect Gut

Francesca Bottacini, Christian Milani, [ ... ], Marco Ventura

An Integrated Pipeline for de Novo Assembly of Microbial Genomes

Andrew Tritt, Jonathan A. Eisen, Marc T. Facciotti, Aaron E. Darling

Theoretical Prediction and Experimental Verification of Protein-Coding Genes in Plant Pathogen Genome Agrobacterium tumefaciens Strain C58

Qian Wang, Yang Lei, [ ... ], Ling-Ling Chen

Strand-Specific RNA-Seq Reveals Ordered Patterns of Sense and Antisense Transcription in Bacillus anthracis

Karla D. Passalacqua, Anjana Varadarajan, [ ... ], Nicholas H. Bergman

Genometa - A Fast and Accurate Classifier for Short Metagenomic Shotgun Reads

Colin F. Davenport, Jens Neugebauer, [ ... ], Frauke Sprengel

A Bioinformatic Strategy for the Detection, Classification and Analysis of Bacterial Autotransporters

Nermin Celik, Chaille T. Webb, [ ... ], Trevor Lithgow

Towards a Better Detection of Horizontally Transferred Genes by Combining Unusual Properties Effectively

Dapeng Xiong, Fen Xiao, [ ... ], Xieping Gao

Comparative Genomics Analysis of Mycobacterium ulcerans for the Identification of Putative Essential Genes and Therapeutic Candidates

Azeem Mehmood Butt, Izza Nasrullah, Shifa Tahir, Yigang Tong

Reduced Set of Virulence Genes Allows High Accuracy Prediction of Bacterial Pathogenicity in Humans

Gregorio Iraola, Gustavo Vazquez, Lucía Spangenberg, Hugo Naya

Genome-Wide Detection of Spontaneous Chromosomal Rearrangements in Bacteria

Song Sun, Rongqin Ke, [ ... ], Dan I. Andersson

Effect of Reference Genome Selection on the Performance of Computational Methods for Genome-Wide Protein-Protein Interaction Prediction

Vijaykumar Yogesh Muley, Akash Ranjan

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