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Bacterial genomics

Prognosis of recurrent bacterial vaginosis based on longitudinal changes in abundance of Lactobacillus and specific species of Gardnerella

Essence Turner, Jack D. Sobel, Robert A. Akins

Distributed hybrid-indexing of compressed pan-genomes for scalable and fast sequence alignment

Altti Ilari Maarala, Ossi Arasalo, [ ... ], Keijo Heljanko

RNA polymerases in strict endosymbiont bacteria with extreme genome reduction show distinct erosions that might result in limited and differential promoter recognition

Cynthia Paola Rangel-Chávez, Edgardo Galán-Vásquez, [ ... ], Agustino Martínez-Antonio

Plasmid analysis of NDM metallo-β-lactamase-producing Enterobacterales isolated in Vietnam

Aki Hirabayashi, Koji Yahara, [ ... ], Masato Suzuki

Genomic insights into methicillin-resistant Staphylococcus pseudintermedius isolates from dogs and humans of the same sequence types reveals diversity in prophages and pathogenicity islands

Nathita Phumthanakorn, Sybille Schwendener, [ ... ], Nuvee Prapasarakul

Comparative genomics of DNA-binding transcription factors in archaeal and bacterial organisms

Luis Martinez-Liu, Rafael Hernandez-Guerrero, [ ... ], Ernesto Perez-Rueda

High-throughput sequencing reveals genetic determinants associated with antibiotic resistance in Campylobacter spp. from farm-to-fork

Shaimaa F. Mouftah, José F. Cobo-Díaz, [ ... ], Mohamed Elhadidy

Evaluating coverage bias in next-generation sequencing of Escherichia coli

Samantha Gunasekera, Sam Abraham, [ ... ], Mark O’Dea

Effect of disinfection agents and quantification of potentially viable Leptospira in fresh water samples using a highly sensitive integrity-qPCR assay

Elise Richard, Pascale Bourhy, [ ... ], Sébastien Wurtzer

Genomic GC content drifts downward in most bacterial genomes

Bert Ely

Pseudoprevotella muciniphila gen. nov., sp. nov., a mucin-degrading bacterium attached to the bovine rumen epithelium

Sang Weon Na, Byung Hee Chun, [ ... ], Myunggi Baik

Genome-wide identification of 5-methylcytosine sites in bacterial genomes by high-throughput sequencing of MspJI restriction fragments

Brian P. Anton, Alexey Fomenkov, Victoria Wu, Richard J. Roberts

Distribution of Merlin in eukaryotes and first report of DNA transposons in kinetoplastid protists

Ana Luisa Kalb Lopes, Eva Kriegová, [ ... ], Adriana Ludwig

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