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Bacterial genetics

In silico antimicrobial resistance profiling of 1,240 Stenotrophomonas maltophilia genomes: AMR gene prevalence, temporal evolution, and ST-specific associations

Laith B. Alhusseini, Firas Nabeeh Jaafar, Ahmed R. Alsharmani, Ebrahim Kouhsari, Mohammad Sholeh

published 09 Jul 2026

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An integrative multi-omics approach points to membrane composition as a key factor in E. coli persistence

Silvia J. Cañas-Duarte, Lei Sun, María Isabel Pérez-López, Cornelia Herrfurth, Lina M. Contreras, Ivo Feussner, Chad Leidy, Johan Paulsson, Diego M. Riaño-Pachón, Juan M. Pedraza, Silvia Restrepo

published 29 Jun 2026

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Genomic characterization of multidrug-resistant Escherichia coli isolated from gills of Labeo rohita: Insight into resistome, virulence and pathogenicity

Amit Kumar, Rahul Singh, Asma Masood, Dhouha Choukaier, Abhinav Kumar, Ankit Dilipkumar Oza, Denekew Alemayehu Alamneh

published 25 Jun 2026

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Phenotypic and molecular characterization of K64 putative hypervirulent carbapenem-resistant Klebsiella pneumoniae

Chunhong Shao, Jian Bao, Xinying Wang, Yan Jin, Ren Ren, Wei Wang, Meijie Jiang

published 25 Jun 2026

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Streptococcus didelphis infection in free-ranging white-eared opossum (Didelphis albiventris) and Brazilian common opossum (Didelphis aurita): pathology, microbiologic, and genomic characterization

Daniel Oliveira dos Santos, Yasmin Gonçalves de Castro, André Duarte Vieira, Bruna Hermine de Campos, Lucas dos Reis de Souza, Nayara Ferreira de Paula, Vasco Azevedo, Bertram Brenig, Caio de Castro Cunha Figueiredo, Letícia Neves Ribeiro, Janaína Ribeiro Duarte, Vinícius Henrique Barbosa Amaral, Carlyle Mendes Coelho, Herlandes Penha Tinoco, Marcelo Pires Nogueira Carvalho, Ayisa Rodrigues de Oliveira, Rodrigo Otávio Silveira Silva, Renato Lima Santos

published 30 Apr 2026

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Direct LAMP for on-site rapid detection of Vibrio parahaemolyticus in shrimp (Litopenaeus vannamei) aquaculture water

Xiaodan Pu, Feng Lu, Qianqian Yang, Zhenyu Han, Xueting Zhu, Jianlei Chen, Dahai Zhang, Xuzhi Zhang

published 29 Apr 2026

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Genome analysis of Lactiplantibacillus plantarum and Levilactobacillus brevis isolated from traditionally fermented Ethiopian kocho and their probiotic properties

Guesh Mulaw, Teklemichael Tesfay, Tesfaye Sisay, Diriba Muleta, Débora Brito Goulart, Olabisi Flora Davies-Bolorunduro, Chioma Ohaeri, Nirupama Narayanan

published 20 Apr 2026

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Single-tube two-step RPA-CRISPR/Cas12b platform for detection of Pseudomonas aeruginosa

Haotian Lin, Shichun Wang, Yuanhong Xie, Congyang Cheng, Junhua Jin, Xiaodong Song, Hongxing Zhang

published 18 Mar 2026

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Distribution and evolution of the LysR-type transcriptional regulators of the Salmonella genus

Dávila S., Rivera-Ramírez A., Gama-Martínez Y., Orozco R., Hernández V. M., Hernández-Lucas I.

published 17 Mar 2026

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Sequencing of the invasive E. coli strain BEN2908 isolated from poultry: A comparative investigation of genomic regions shared with intestinal and extraintestinal model E. coli strains

Tobias Weber Martins, Angélina Trotereau, Simone Lahnig-Jacques, Maxime Branger, Sébastien Houle, Charles M. Dozois, Daniel Brisotto Pavanelo, Fabiana Horn, Catherine Schouler

published 23 Feb 2026

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Development of a multiplex ddPCR assay for simultaneous absolute quantification of bacterial, fungal, and human DNA

Guohong Huang, Torrey L. Gallagher, Gregory J. Tsongalis, Joel A. Lefferts

published 20 Feb 2026

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Contrastive learning-driven spatiotemporal dynamically adaptive framework for stylized 3D human motion generation

Zhiqiang Song, Ruyan Zhang, Shuangjun Li, Chao Liu

published 19 Feb 2026

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Genomic and chemical insights into a human lectin-binding extracellular polysaccharides from Parageobacillus toebii strain H-70

Diana Ghevondyan, Armine Margaryan, Fabrizio Chiodo, Yvette van Kooyk, Ilaria Finore, Annarita Poli, Hovik Panosyan

published 08 Jan 2026

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