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Bacterial genetics

Throughput screening of Bacillus subtilis strains that abundantly secrete surfactin in vitro identifies effective probiotic candidates

Dongho Lee, Taehoon Oh, Bongseok Kang, Jong Seok Ahn, Yangrae Cho

published 23 Nov 2022

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Divergent gene expression responses in two Baltic Sea heterotrophic model bacteria to dinoflagellate dissolved organic matter

Christofer M. G. Osbeck, Daniel Lundin, Camilla Karlsson, Jonna E. Teikari, Mary Ann Moran, Jarone Pinhassi

published 17 Nov 2022

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Identification of shared bacterial strains in the vaginal microbiota of related and unrelated reproductive-age mothers and daughters using genome-resolved metagenomics

Michael T. France, Sarah E. Brown, Anne M. Rompalo, Rebecca M. Brotman, Jacques Ravel

published 26 Oct 2022

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Taxonomic revision of the genus Amphritea supported by genomic and in silico chemotaxonomic analyses, and the proposal of Aliamphritea gen. nov.

Ryota Yamano, Juanwen Yu, Chunqi Jiang, Alfabetian Harjuno Condro Haditomo, Sayaka Mino, Yuichi Sakai, Tomoo Sawabe

published 10 Aug 2022

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Genome insights from the identification of a novel Pandoraea sputorum isolate and its characteristics

Rui-Fang Gao, Ying Wang, Ying Wang, Zhi-Wen Wang, Gui-Ming Zhang

published 05 Aug 2022

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Measuring quality of DNA sequence data via degradation

Alan F. Karr, Jason Hauzel, Adam A. Porter, Marcel Schaefer

published 03 Aug 2022

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Atypical integrative element with strand-biased circularization activity assists interspecies antimicrobial resistance gene transfer from Vibrio alfacsensis

Lisa Nonaka, Michiaki Masuda, Hirokazu Yano

published 02 Aug 2022

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The dynamic network of IS30 transposition pathways

Ferenc Olasz, Mónika Szabó, Alexandra Veress, Márton Bibó, János Kiss

published 28 Jul 2022

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A taxonomically representative strain collection to explore xenobiotic and secondary metabolism in bacteria

Evanthia Kontomina, Vasiliki Garefalaki, Konstantina C. Fylaktakidou, Dorothea Evmorfidou, Athina Eleftheraki, Marina Avramidou, Karen Udoh, Maria Panopoulou, Tamás Felföldi, Károly Márialigeti, Giannoulis Fakis, Sotiria Boukouvala

published 14 Jul 2022

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MAECI: A pipeline for generating consensus sequence with nanopore sequencing long-read assembly and error correction

Jidong Lang

published 20 May 2022

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High quality genome annotation and expression visualisation of a mupirocin-producing bacterium

Anthony S. Haines, Steve G. Kendrew, Nicola Crowhurst, Elton R. Stephens, Jack Connolly, Joanne Hothersall, Claire E. Miller, Andrew J. Collis, Benjamin D. Huckle, Christopher M. Thomas

published 05 May 2022

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Isolation, identification, and whole-genome sequencing of high-yield protease bacteria from Daqu of ZhangGong Laojiu

Yanbo Liu, Junying Fu, Linlin Wang, Zhijun Zhao, Huihui Wang, Suna Han, Xiyu Sun, Chunmei Pan

published 26 Apr 2022

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Purification and characterization of antifungal lipopeptide produced by Bacillus velezensis isolated from raw honey

Zirui Ray Xiong, Mario Cobo, Randy M. Whittal, Abigail B. Snyder, Randy W. Worobo

published 06 Apr 2022

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