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Algorithms

Using Interpolation to Estimate System Uncertainty in Gene Expression Experiments

Lee J. Falin, Brett M. Tyler

published 22 Jul 2011

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Fast, Scalable, Bayesian Spike Identification for Multi-Electrode Arrays

Jason S. Prentice, Jan Homann, Kristina D. Simmons, Gašper Tkačik, Vijay Balasubramanian, Philip C. Nelson

published 20 Jul 2011

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Predicting the Tolerated Sequences for Proteins and Protein Interfaces Using RosettaBackrub Flexible Backbone Design

Colin A. Smith, Tanja Kortemme

published 18 Jul 2011

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Accelerating Haplotype-Based Genome-Wide Association Study Using Perfect Phylogeny and Phase-Known Reference Data

Yungang He, Cong Li, Christopher I. Amos, Momiao Xiong, Hua Ling, Li Jin

published 15 Jul 2011

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Using an Uncertainty-Coding Matrix in Bayesian Regression Models for Haplotype-Specific Risk Detection in Family Association Studies

Yung-Hsiang Huang, Mei-Hsien Lee, Wei J. Chen, Chuhsing Kate Hsiao

published 15 Jul 2011

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Brown Planthopper (N. lugens Stal) Feeding Behaviour on Rice Germplasm as an Indicator of Resistance

Mohamad Bahagia AB Ghaffar, Jeremy Pritchard, Brian Ford-Lloyd

published 14 Jul 2011

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High-Resolution Quantification of Focal Adhesion Spatiotemporal Dynamics in Living Cells

Mathew E. Berginski, Eric A. Vitriol, Klaus M. Hahn, Shawn M. Gomez

published 14 Jul 2011

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High Resolution Detection and Analysis of CpG Dinucleotides Methylation Using MBD-Seq Technology

Xun Lan, Christopher Adams, Mark Landers, Miroslav Dudas, Daniel Krissinger, George Marnellos, Russell Bonneville, Maoxiong Xu, Junbai Wang, Tim H.-M. Huang, Gavin Meredith, Victor X. Jin

published 11 Jul 2011

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Resolution of the Stochastic Strategy Spatial Prisoner's Dilemma by Means of Particle Swarm Optimization

Jianlei Zhang, Chunyan Zhang, Tianguang Chu, Matjaž Perc

published 07 Jul 2011

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A Generic Program for Multistate Protein Design

Andrew Leaver-Fay, Ron Jacak, P. Benjamin Stranges, Brian Kuhlman

published 06 Jul 2011

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Simplified Method to Predict Mutual Interactions of Human Transcription Factors Based on Their Primary Structure

Sebastian Schmeier, Boris Jankovic, Vladimir B. Bajic

published 05 Jul 2011

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Explicit-Duration Hidden Markov Model Inference of UP-DOWN States from Continuous Signals

James M. McFarland, Thomas T. G. Hahn, Mayank R. Mehta

published 28 Jun 2011

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An FPGA Implementation to Detect Selective Cationic Antibacterial Peptides

Carlos Polanco González, Marco Aurelio Nuño Maganda, Miguel Arias-Estrada, Gabriel del Rio

published 28 Jun 2011

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