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Algorithms

Conformational Determinants of Phosphotyrosine Peptides Complexed with the Src SH2 Domain

Joseph Nachman, Gerry Gish, Cristina Virag, Tony Pawson, Régis Pomès, Emil Pai

published 21 Jun 2010

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Flexible Kernel Memory

Dimitri Nowicki, Hava Siegelmann

published 11 Jun 2010

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Gene Set-Based Module Discovery Decodes cis-Regulatory Codes Governing Diverse Gene Expression across Human Multiple Tissues

Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, Satoru Miyano

published 09 Jun 2010

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W-Curve Alignments for HIV-1 Genomic Comparisons

Douglas J. Cork, Steven Lembark, Sodsai Tovanabutra, Merlin L. Robb, Jerome H. Kim

published 01 Jun 2010

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Validation of Coevolving Residue Algorithms via Pipeline Sensitivity Analysis: ELSC and OMES and ZNMI, Oh My!

Christopher A. Brown, Kevin S. Brown

published 01 Jun 2010

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Monte Carlo Simulation of Bony Heterogeneity Effects on Dose Profile for Small Irradiation Field in Radiotherapy

Simone C. Cardoso, Victor Gabriel L. Alves, Luiz Antonio R. da Rosa, Luciana T. Campos, Delano V. S. Batista, Alessandro Facure

published 03 May 2010

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Involving Motor Capabilities in the Formation of Sensory Space Representations

Daniel Weiller, Robert Märtin, Sven Dähne, Andreas K. Engel, Peter König

published 28 Apr 2010

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Eigenvector Centrality Mapping for Analyzing Connectivity Patterns in fMRI Data of the Human Brain

Gabriele Lohmann, Daniel S. Margulies, Annette Horstmann, Burkhard Pleger, Joeran Lepsien, Dirk Goldhahn, Haiko Schloegl, Michael Stumvoll, Arno Villringer, Robert Turner

published 27 Apr 2010

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A Parallel Implementation of the Network Identification by Multiple Regression (NIR) Algorithm to Reverse-Engineer Regulatory Gene Networks

Francesco Gregoretti, Vincenzo Belcastro, Diego di Bernardo, Gennaro Oliva

published 21 Apr 2010

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Functional Clustering of Periodic Transcriptional Profiles through ARMA(p,q)

Ning Li, Timothy McMurry, Arthur Berg, Zhong Wang, Scott A. Berceli, Rongling Wu

published 16 Apr 2010

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Efficient and Exact Sampling of Simple Graphs with Given Arbitrary Degree Sequence

Charo I. Del Genio, Hyunju Kim, Zoltán Toroczkai, Kevin E. Bassler

published 08 Apr 2010

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Inference of Functional Relations in Predicted Protein Networks with a Machine Learning Approach

Beatriz García-Jiménez, David Juan, Iakes Ezkurdia, Eduardo Andrés-León, Alfonso Valencia

published 01 Apr 2010

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Empirical Evaluation of Oligonucleotide Probe Selection for DNA Microarrays

Jennifer G. Mulle, Viren C. Patel, Stephen T. Warren, Madhuri R. Hegde, David J. Cutler, Michael E. Zwick

published 29 Mar 2010

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