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Algorithms

Murasaki: A Fast, Parallelizable Algorithm to Find Anchors from Multiple Genomes

Kris Popendorf, Hachiya Tsuyoshi, Yasunori Osana, Yasubumi Sakakibara

Linear Control Theory for Gene Network Modeling

Yong-Jun Shin, Leonidas Bleris

Systematic Characterizations of Text Similarity in Full Text Biomedical Publications

Zhaohui Sun, Mounir Errami, [ ... ], Harold Garner

Diffusion Model Based Spectral Clustering for Protein-Protein Interaction Networks

Kentaro Inoue, Weijiang Li, Hiroyuki Kurata

Community Landscapes: An Integrative Approach to Determine Overlapping Network Module Hierarchy, Identify Key Nodes and Predict Network Dynamics

István A. Kovács, Robin Palotai, Máté S. Szalay, Peter Csermely

Prediction of Nucleosome Positioning Based on Transcription Factor Binding Sites

Xianfu Yi, Yu-Dong Cai, [ ... ], Xiangyin Kong

A Novel Preprocessing Method Using Hilbert Huang Transform for MALDI-TOF and SELDI-TOF Mass Spectrometry Data

Li-Ching Wu, Hsin-Hao Chen, [ ... ], Kuang-Fu Cheng

Optimizing Combination Therapies with Existing and Future CML Drugs

Allen A. Katouli, Natalia L. Komarova

Partitioning of Minimotifs Based on Function with Improved Prediction Accuracy

Sanguthevar Rajasekaran, Tian Mi, [ ... ], Martin R. Schiller

Inferring Geographic Coordinates of Origin for Europeans Using Small Panels of Ancestry Informative Markers

Petros Drineas, Jamey Lewis, Peristera Paschou

Accumulative Difference Image Protocol for Particle Tracking in Fluorescence Microscopy Tested in Mouse Lymphonodes

Carlo E. Villa, Michele Caccia, [ ... ], Giuseppe Chirico

A New Measure of Centrality for Brain Networks

Karen E. Joyce, Paul J. Laurienti, Jonathan H. Burdette, Satoru Hayasaka

Trigonometric Regressive Spectral Analysis Reliably Maps Dynamic Changes in Baroreflex Sensitivity and Autonomic Tone: The Effect of Gender and Age

Manja Reimann, Constanze Friedrich, [ ... ], Tjalf Ziemssen

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