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Algorithms

Design Principles of a Genetic Alarm Clock

Jaroslav Albert, Marianne Rooman

Identification and Cluster Analysis of Streptococcus pyogenes by MALDI-TOF Mass Spectrometry

Jie Wang, Na Zhou, [ ... ], Hua Jiang

Identifying Discrete States of a Biological System Using a Novel Step Detection Algorithm

Jan Opfer, Kay-Eberhard Gottschalk

Evaluation of a Multicore-Optimized Implementation for Tomographic Reconstruction

Jose-Ignacio Agulleiro, José Jesús Fernández

Estimation and Discrimination of Stochastic Biochemical Circuits from Time-Lapse Microscopy Data

David Thorsley, Eric Klavins

Top-Down Feedback in an HMAX-Like Cortical Model of Object Perception Based on Hierarchical Bayesian Networks and Belief Propagation

Salvador Dura-Bernal, Thomas Wennekers, Susan L. Denham

A Framework for Regularized Non-Negative Matrix Factorization, with Application to the Analysis of Gene Expression Data

Leo Taslaman, Björn Nilsson

A Single Kernel-Based Approach to Extract Drug-Drug Interactions from Biomedical Literature

Yijia Zhang, Hongfei Lin, [ ... ], Yanpeng Li

PairMotif: A New Pattern-Driven Algorithm for Planted (l, d) DNA Motif Search

Qiang Yu, Hongwei Huo, Yipu Zhang, Hongzhi Guo

A New Family of Cumulative Indexes for Measuring Scientific Performance

Marcin Kozak, Lutz Bornmann

A Scatter-Based Prototype Framework and Multi-Class Extension of Support Vector Machines

Robert Jenssen, Marius Kloft, [ ... ], Klaus-Robert Müller

Convex Non-Negative Matrix Factorization for Brain Tumor Delimitation from MRSI Data

Sandra Ortega-Martorell, Paulo J. G. Lisboa, [ ... ], Carles Arús

A Network Analysis of Countries’ Export Flows: Firm Grounds for the Building Blocks of the Economy

Guido Caldarelli, Matthieu Cristelli, [ ... ], Andrea Tacchella

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