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Algorithms

SOAP3-dp: Fast, Accurate and Sensitive GPU-Based Short Read Aligner

Ruibang Luo, Thomas Wong, [ ... ], Tak-Wah Lam

Quantitative Analysis of Calcium Spikes in Noisy Fluorescent Background

Radoslav Janicek, Matej Hotka, [ ... ], Ivan Zahradník

Insights into the Folding and Unfolding Processes of Wild-Type and Mutated SH3 Domain by Molecular Dynamics and Replica Exchange Molecular Dynamics Simulations

Wen-Ting Chu, Ji-Long Zhang, [ ... ], Hong-Xing Zhang

Disease-Associated miRNA-mRNA Networks in Oral Lichen Planus

Volker Gassling, Jochen Hampe, [ ... ], Robert Häsler

Validating Predictions from Climate Envelope Models

James I. Watling, David N. Bucklin, [ ... ], Stephanie S. Romañach

Fourier Transform Infrared Imaging and Infrared Fiber Optic Probe Spectroscopy Identify Collagen Type in Connective Tissues

Arash Hanifi, Helen McCarthy, Sally Roberts, Nancy Pleshko

Evaluation of a Multiplex Assay for Estimation of HIV-1 Incidence

Kelly A. Curtis, Debra L. Hanson, M. Susan Kennedy, S. Michele Owen

Bacterial Chemotaxis: Introverted or Extroverted? A Comparison of the Advantages and Disadvantages of Basic Forms of Metabolism-Based and Metabolism-Independent Behavior Using a Computational Model

Matthew D. Egbert

Differentiation of Pancreatic Cancer and Chronic Pancreatitis Using Computer-Aided Diagnosis of Endoscopic Ultrasound (EUS) Images: A Diagnostic Test

Maoling Zhu, Can Xu, [ ... ], Zhaoshen Li

Optimizing Complexity Measures for fMRI Data: Algorithm, Artifact, and Sensitivity

Denis Rubin, Tomer Fekete, Lilianne R. Mujica-Parodi

PeSV-Fisher: Identification of Somatic and Non-Somatic Structural Variants Using Next Generation Sequencing Data

Geòrgia Escaramís, Cristian Tornador, [ ... ], Xavier Estivill

Distributed Coordination of Heterogeneous Agents Using a Semantic Overlay Network and a Goal-Directed Graphplan Planner

António Luís Lopes, Luís Miguel Botelho

Information Filtering via a Scaling-Based Function

Tian Qiu, Zi-Ke Zhang, Guang Chen

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