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Algorithms

ReacKnock: Identifying Reaction Deletion Strategies for Microbial Strain Optimization Based on Genome-Scale Metabolic Network

Zixiang Xu, Ping Zheng, Jibin Sun, Yanhe Ma

ReliefSeq: A Gene-Wise Adaptive-K Nearest-Neighbor Feature Selection Tool for Finding Gene-Gene Interactions and Main Effects in mRNA-Seq Gene Expression Data

Brett A. McKinney, Bill C. White, [ ... ], Ann L. Oberg

Employing a Monte Carlo Algorithm in Newton-Type Methods for Restricted Maximum Likelihood Estimation of Genetic Parameters

Kaarina Matilainen, Esa A. Mäntysaari, [ ... ], Robin Thompson

Diagnosing Developmental Dyscalculia on the Basis of Reliable Single Case FMRI Methods: Promises and Limitations

Philipp Johannes Dinkel, Klaus Willmes, [ ... ], Jan Willem Koten Jr

An Adaptive Physical Activity Intervention for Overweight Adults: A Randomized Controlled Trial

Marc A. Adams, James F. Sallis, [ ... ], Elyse Perata

Analyzing Kernel Matrices for the Identification of Differentially Expressed Genes

Xiao-Lei Xia, Huanlai Xing, Xueqin Liu

Automated Identification and Location Analysis of Marked Stem Cells Colonies in Optical Microscopy Images

Vincenzo Paduano, Daniela Tagliaferri, Geppino Falco, Michele Ceccarelli

Bayesian Networks for Clinical Decision Support in Lung Cancer Care

M. Berkan Sesen, Ann E. Nicholson, [ ... ], Michael Brady

Simulating the Dynamics of Scale-Free Networks via Optimization

Tiago Alves Schieber, Martín Gómez Ravetti

Bayesian Centroid Estimation for Motif Discovery

Luis Carvalho

Stability-Based Comparison of Class Discovery Methods for DNA Copy Number Profiles

Isabel Brito, Philippe Hupé, Pierre Neuvial, Emmanuel Barillot

Stereoscopic Depth Perception Using a Model Based on the Primary Visual Cortex

Fernanda da C. e C. Faria, Jorge Batista, Helder Araújo

Impact of Noise on Molecular Network Inference

Radhakrishnan Nagarajan, Marco Scutari

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