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Alanine scanning

Antibody designing against IIIabc junction (JIIIabc) of HCV IRES through affinity maturation; RNA-Antibody docking and interaction analysis

Saima Ejaz, Rehan Zafar Paracha, Sadaf Ejaz, Zunera Jamal

published 08 Sep 2023

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Structural and molecular basis of angiotensin-converting enzyme by computational modeling: Insights into the mechanisms of different inhibitors

Li Fang, Mingxian Geng, Chunlei Liu, Ji Wang, Weihong Min, Jingsheng Liu

published 18 Apr 2019

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Probing inhibition mechanisms of adenosine deaminase by using molecular dynamics simulations

Xiaopian Tian, Ye Liu, Jingxuan Zhu, Zhengfei Yu, Jiarui Han, Yan Wang, Weiwei Han

published 16 Nov 2018

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Energetic Landscape of MDM2-p53 Interactions by Computational Mutagenesis of the MDM2-p53 Interaction

Kelly M. Thayer, George A. Beyer

published 18 Mar 2016

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A Web Resource for Standardized Benchmark Datasets, Metrics, and Rosetta Protocols for Macromolecular Modeling and Design

Shane Ó Conchúir, Kyle A. Barlow, Roland A. Pache, Noah Ollikainen, Kale Kundert, Matthew J. O'Meara, Colin A. Smith, Tanja Kortemme

published 03 Sep 2015

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Affinity Maturation of Monoclonal Antibody 1E11 by Targeted Randomization in CDR3 Regions Optimizes Therapeutic Antibody Targeting of HER2-Positive Gastric Cancer

Bong-Kook Ko, Soyoung Choi, Lei Guang Cui, Young-Ha Lee, In-Sik Hwang, Kyu-Tae Kim, Hyunbo Shim, Jong-Seo Lee

published 30 Jul 2015

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Analysis of Potato virus Y Coat Protein Epitopes Recognized by Three Commercial Monoclonal Antibodies

Yan-Ping Tian, Jussi Hepojoki, Harri Ranki, Hilkka Lankinen, Jari P. T. Valkonen

published 26 Dec 2014

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Identification of Functionally Important Residues of the Rat P2X4 Receptor by Alanine Scanning Mutagenesis of the Dorsal Fin and Left Flipper Domains

Vendula Tvrdonova, Milos B. Rokic, Stanko S. Stojilkovic, Hana Zemkova

published 14 Nov 2014

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Structural and Energetic Effects of A_2A Adenosine Receptor Mutations on Agonist and Antagonist Binding

Henrik Keränen, Hugo Gutiérrez-de-Terán, Johan Åqvist

published 06 Oct 2014

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Binding Modes of Three Inhibitors 8CA, F8A and I4A to A-FABP Studied Based on Molecular Dynamics Simulation

Jianzhong Chen, Jinan Wang, Weiliang Zhu

published 11 Jun 2014

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Mutational Analysis of the Ve1 Immune Receptor That Mediates Verticillium Resistance in Tomato

Zhao Zhang, Yin Song, Chun-Ming Liu, Bart P. H. J. Thomma

published 09 Jun 2014

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Ligand Recognition by the TPR Domain of the Import Factor Toc64 from Arabidopsis thaliana

Rashmi Panigrahi, Abdussalam Adina-Zada, James Whelan, Alice Vrielink

published 31 Dec 2013

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Differences in the Binding Affinities of ErbB Family: Heterogeneity in the Prediction of Resistance Mutants

Mariana Pereira, Chandra S. Verma, Gloria Fuentes

published 23 Oct 2013

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