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Phylogenetics

Evidence for Variation in the Effective Population Size of Animal Mitochondrial DNA

Gwenael Piganeau, Adam Eyre-Walker

Phylogenetic Resolution and Quantifying the Phylogenetic Diversity and Dispersion of Communities

Nathan G. Swenson

The Tree versus the Forest: The Fungal Tree of Life and the Topological Diversity within the Yeast Phylome

Marina Marcet-Houben, Toni Gabaldón

Using Sequence Similarity Networks for Visualization of Relationships Across Diverse Protein Superfamilies

Holly J. Atkinson, John H. Morris, Thomas E. Ferrin, Patricia C. Babbitt

Compound Evolutionary History of the Rhesus Macaque Mhc Class I B Region Revealed by Microsatellite Analysis and Localization of Retroviral Sequences

Gaby G. M. Doxiadis, Corrine M. C. Heijmans, [ ... ], Ronald E. Bontrop

Genetic Editing of HBV DNA by Monodomain Human APOBEC3 Cytidine Deaminases and the Recombinant Nature of APOBEC3G

Michel Henry, Denise Guétard, [ ... ], Jean-Pierre Vartanian

Evolution of Reproductive Morphology in Leaf Endophytes

Zheng Wang, Peter R. Johnston, Zhu L. Yang, Jeffrey P. Townsend

Are Hox Genes Ancestrally Involved in Axial Patterning? Evidence from the Hydrozoan Clytia hemisphaerica (Cnidaria)

Roxane Chiori, Muriel Jager, [ ... ], Eric Quéinnec

Complete Genome Sequence of the Aerobic CO-Oxidizing Thermophile Thermomicrobium roseum

Dongying Wu, Jason Raymond, [ ... ], Jonathan A. Eisen

Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii

Konstantinos Mavromatis, Natalia Ivanova, [ ... ], Nikos C. Kyrpides

Versatile Aggressive Mimicry of Cicadas by an Australian Predatory Katydid

David C. Marshall, Kathy B. R. Hill

Mitochondrial Phylogeography Illuminates the Origin of the Extinct Caspian Tiger and Its Relationship to the Amur Tiger

Carlos A. Driscoll, Nobuyuki Yamaguchi, [ ... ], Stephen J. O'Brien

Giant Panda Genomic Data Provide Insight into the Birth-and-Death Process of Mammalian Major Histocompatibility Complex Class II Genes

Qiu-Hong Wan, Chang-Jun Zeng, [ ... ], Sheng-Guo Fang

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