https://orcid.org/0000-0002-3397-179X
Figures
Abstract
Studies of the outcome of Pseudomonas aeruginosa bacteremia (Pab) have focused mainly on antibiotic appropriateness. However, P. aeruginosa possesses many virulence factors whose roles in outcomes have not been examined in humans, except for the type III secretion system (T3SS) toxins. The purpose of this study was to examine the role of virulence factors other than the T3SS toxins. Bacterial isolates were collected from 75 patients who suffered from Pa blood stream infections. Host factors such as neutropenia, immunosuppression, comorbidities, time to effective antibiotics, source of bacteremia, and presence of multidrug resistant (MDR) isolate were studied. The isolates were analyzed for the presence of toxin genes, proteolytic activity, swimming and twitching motility, and pyocyanin production. The data were analyzed to ascertain which virulence factors correlated with poor outcomes defined as septic shock or death (SS) within 7 days. Septic shock or death occurred in 25/75 patients. Univariate analysis identified age as a host factor that exerted a significant effect on these outcomes. Ineffective antibiotics administered during the first 24 hours of treatment or MDR P. aeruginosa did not influence the frequency of SS, nor did the presence of lasB, exoA, exoS exoU, plcH genes and proteolytic activity. However, 6/8 patients infected with non-motile isolates, developed SS, p = 0.014 and 5/6 isolates that produced large amounts of pyocyanin (>18ug/ml), were associated with SS, p = 0.014. Multivariate analysis indicated that the odds ratio (OR) for development of SS with a non-motile isolate was 6.8, with a 95% confidence interval (CI) (1.37, 51.5), p = 0.030 and with high pyocyanin producing isolates, an OR of 16.9, 95% CI = (2.27, 360), p = .017. This study evaluating the role of microbial factors that significantly effect outcomes following Pa bloodstream infection suggests that P. aeruginosa strains showing high pyocyanin production and the lack of motility independently increase the risk of SS.
Citation: Gupte A, Jyot J, Ravi M, Ramphal R (2021) High pyocyanin production and non-motility of Pseudomonas aeruginosa isolates are correlated with septic shock or death in bacteremic patients. PLoS ONE 16(6): e0253259. https://doi.org/10.1371/journal.pone.0253259
Editor: Rashid Nazir, COMSATS University Islamabad - Abbottabad Campus, PAKISTAN
Received: August 11, 2020; Accepted: June 1, 2021; Published: June 11, 2021
This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.
Data Availability: All relevant data are within the paper and its Supporting Information files.
Funding: This work was supported in part by grant from National Institutes of Health grant 1R01AI078770-01A1 to RR. This work was supported in part by University of Florida-Gatorade internal funding to AG. There was no additional external funding received for this study.
Competing interests: The authors have declared that no competing interests exist.
Introduction
P. aeruginosa is reported to cause the highest mortality rate among common gram negative bloodstream infections (BSI) [1, 2]. The appropriateness of antibiotic therapy and host factors have been implicated in determining its outcome [3–5], but there appear to be other elements involved, since patients die from Pab even when treated appropriately [6] and patients treated inappropriately, survive. Among host factors, a pulmonary focus carries the highest mortality rate [3]. Neutropenia has also been strongly associated with deaths [7, 8]. Other host factors implicated generally reflect multiorgan dysfunction that is likely to contribute to mortality. Thus far, persistent neutropenia is the best defined host factor that affects the outcome of Pab [7, 8].
The role that the different virulence factors of P. aeruginosa play in poor outcomes in humans has received comparatively little attention although there are a plethora of animal studies aiming to define the virulence factors that play roles in death due to P. aeruginosa [9–11]. In animals, the products of the type III and type II secretion (T3SS and T2SS respectively) systems of P. aeruginosa have been implicated in death due to lung infections [12–15]. In humans, there is also evidence that the T3SS associated toxins may be involved in death due to lung infections [16, 17]. However, there is a paucity of data concerning role of bacterial factors involved in poor outcomes in BSI. One study examined 30-day mortality following Pab and concluded that the presence of a functioning T3SS was highly associated with death [18]. A second study reported that the presence of the exoU gene that encodes a phospholipase toxin, secreted by the T3SS of P. aeruginosa is significantly associated with early deaths in blood stream infections [19], but not with overall mortality. However, not all early deaths or the occurrence of septic shock could be explained by the presence of this genotype or failure of antibiotic therapy, implying that other virulence factors may be involved [20, 21]. The main purpose of this study was therefore to broadly examine the virulence factors of isolates from patients with poor outcomes from Pab. We define poor outcomes as the development of septic shock or death within a 7-day period from the day a positive blood culture was obtained. The rationale for using this time frame being that septic shock is the antecedent event to death, but many patients survive septic shock with the advanced supportive care measures currently used, despite having what can be regarded as a poor outcome. Additionally, among patients who die beyond the 7-day period, death may be due to a comorbid condition. In this study we evaluated host factors such as neutropenia, immunosuppression, comorbidities, time to effective antibiotics, duration and source of bacteremia, as well as presence of MDR P. aeruginosa isolates. Further, we examined the presence or absence of virulence factors genes such as: lasB, which encodes the major secreted elastase of Pa; exoA, which encodes exotoxinA; exoS and exoU which encode the major toxins secreted by T3SS; and plcH, which encodes the hemolytic phospholipase. Phenotypic analysis of these virulence factors was not performed. It was not our purpose to reexamine antibiotic therapy for Pab in depth, since this has been exhaustively examined [22].
Materials and methods
Study design and subjects
The first blood isolates from patients with a laboratory diagnosis of Pab were retrieved from the microbiology laboratory within a week of bacteremia and frozen at -70°C in 25% sterile glycerol. Following discharge or death of the patients, their medical records were examined and demographic data, data pertaining to underlying diseases, treatment and outcomes were extracted from the charts. The study was approved by the Institutional Review Board (IRB) of University of Florida (UF) and Shands Hospital, which at that time was a 625-bed tertiary care primary teaching hospital for the University of Florida, College of Medicine, with the full complement of Medical and Surgical Specialties. Informed consent was waived by the UF IRB. No patient suffered more than one episode of Pab. Patient data and bacterial isolates were collected between October 2007 and July 2009. Patients <18 years of age, pregnant females and patients with polymicrobial bacteremia were excluded.
Definitions
Bacteremia was defined as ≥1 blood culture growing P. aeruginosa. The duration of bacteremia was scored as the number of days the blood cultures remained positive.
Septic shock was defined as hypotension with systolic blood pressure of <90 mm Hg or mean arterial pressure <65 mm Hg, that was unresponsive to fluid administration alone, in the setting of a positive blood culture for P. aeruginosa.
Effective antibiotic therapy was defined as the administration of at least one antibiotic to which the infecting bacterium was susceptible, within a 24-hour period of the positive blood culture. No patient received an aminoglycoside alone as primary therapy.
Multidrug resistance was defined as resistance to three single anti-Pseudomonal drugs within three different classes of antibiotics, including aminoglycosides, the anti-Pseudomonal cephalosporins, carbapenems, and antipseudomonal penicillin/beta-lactamase inhibitors.
Sources of the infection were based on clinical assessment or site from which the organism was isolated. Sources were classified as abdomen, burns/wound, line/endovascular, pneumonia/lung, urine, and unknown.
Comorbidities were noted as the type of underlying diseases, e.g. cancer, burns, kidney disease, diabetes mellitus (DM), gastrointestinal disease (GI disease), solid organ transplantation (SOT), cardiovascular disease and other.
Neutropenia was defined as <500 neutrophils/ul of blood at the time the blood cultures were obtained.
Immunosuppression was defined as compromised immune system due to cancer therapy, SOT immunosuppression, biologics, or chronic steroid therapy (prednisone dose equivalent of 5 mg or more for more than 3 months).
Detection of genes encoding the major Pseudomonas toxins
Polymerase chain reaction (PCR) assays for detection of exoS, exoU, exoA, lasB, plcH genes were performed with primers and protocol described by Feltman et al [23] with modifications. P. aeruginosa isolates were grown as individual colonies on LB agar plates. A single colony was then inoculated in LB medium and grown overnight at 37°C. Chromosomal DNA was extracted using Promega kits (catalog no. A1120). Primers for exoA, lasB, plcH, exoS, and exoU genes were designed based on known gene sequence and synthesized by Geno-Mechanix, Gainesville, Florida (S1 Table). PCR reactions were performed with AmpliTaq DNA polymerase in a DNA thermal cycler (Thermo Fisher), under the following conditions: denaturation for 10 minutes at 95°C, followed by 35 cycles of 90°C for 60 seconds and 70°C for 4 minutes, and a final extension step of 10 minutes at 72°C. Chromosomal DNA from P. aeruginosa laboratory strains PAK (wild-type laboratory strain/motile which carries exoS, and PA14 (carries exoU) were used as positive controls to detect the presence of these two toxin genes, the two genes being almost always being mutually exclusive in the same strain [23]. For isolate 87, PCRs did not work despite repeated efforts. PCR products were electrophoresed through agarose gels (0·8%, w/v) containing ethidium bromide (0·5 μg/ml) and visualized using UV light (S1 and S2 Figs).
Swimming and twitching motility
P. aeruginosa clinical isolates and controls were grown overnight on Luria agar plates at 37°C. A single colony was used for further evaluation and experiments were performed in triplicates. The swimming motility (referred to simply as motility in further sections) of different P. aeruginosa strains was assessed qualitatively by examining the circular swarm from the growing motile bacterial cells on 0.325% agar plates at 37°C after point inoculation breaking the surface of agar and scored as motile or non-motile [24]. Strain PAK and its non-motile mutant [25] served as positive and negative controls.
Twitching motility, indicative of the presence of functioning Pseudomonas pili was ascertained using point inoculation of single colony, in triplicates, with a sterile toothpick at the bottom of 1% Luria agar plates [Difco LB broth (10 g/liter tryptone/5 g/liter yeast extract/10 g/liter NaCl) solidified with 1% (wt/vol) Difco granulated agar]. After incubation at 37°C for 24 h, the zone of motility at the agar/Petri dish interface was measured as present or absent [26].
Proteolytic activity
Each clinical isolate and the control PAK strain were grown on Luria agar plates with overnight incubation at 37°C. The proteolytic activity of each P. aeruginosa strain was determined on skim milk agar by inoculating the surface with a sterile toothpick performed. The assay was performed in triplicate for each strain. The diameter of the zone of proteolysis as indicated by clearing of the milk agar was noted after 24 h of incubation at 37°C [27].
Pyocyanin production
Pyocyanin production was assayed on the basis of the absorbance of pyocyanin at 520 nm in an acidic solution. Five ml of supernatant from a stationary-phase culture (16 h) in Luria broth was mixed with 3 ml of chloroform after adjustment for the background of optical density (OD). Pyocyanin from the chloroform phase was then reextracted into 1 ml of 0.2 N HCl giving a pink to deep red solution. Concentrations, expressed as micrograms of pyocyanin produced per milliliter of culture supernatant, were determined by multiplying the OD at 520 nm by 17.072 [28]. A consistently high pyocyanin producing clinical isolate, isolate 4- from our study and an isolate that did not produce pyocyanin, isolate 6, were used as positive and negative controls respectively for all pyocyanin measurements. Each blood stream isolate was evaluated in triplicate.
Western blot analysis for flagellin and electron microscopic studies for flagella
The presence of flagellin in whole cell lysates was assessed using Western Blot Analysis. Bacterial cultures were grown in Luria broth overnight. The cells were centrifuged and the pellet was lysed in 1× SDS buffer (2% SDS, 1% β‐mercaptoethanol, 50mM Tris HCl, pH = 7.5) in one‐tenth of the culture volume and boiled. The lysed extracts were electrophoresed on a 10% SDS‐polyacrylamide gel. The proteins were transferred by electro transfer to 0.45μm size PVDF membranes. The blots were developed using rabbit anti-flagellin polyclonal antibody as primary antibody [25]. Alkaline phosphatase‐conjugated anti‐rabbit IgG was used as the secondary antibody (Bio-Rad 170–6518). The blots were developed using NBT and BCIP color substrates using Bio-Rad Kit (catalog # 170–6532). PAK-D (PAK fliD mutant that overexpresses flagellin) [29] was used as positive control and PAKΔfliC mutant [30] that does not produce flagellin was used as negative control (S3 Fig). All non-motile strains were examined by electron microscopy after negative staining, to evaluate for presence of flagellum. PAK and its non-motile mutant were used as positive and negative controls respectively. Static cultures were grown overnight at 37°C. A drop of the culture was allowed to adhere to a carbon-coated grid for 10s and drained off; the grid was then rinsed in a drop of saline, and adherent cells were negatively stained with a 2% aqueous solution of phosphotungstic acid for 10s. Samples were examined with a Hitachi H-7000 transmission electron microscope [31]. The EM was performed by the EM laboratory at the University of Florida ICBR. Strains that did not demonstrate flagella were re-evaluated to verify the absence of flagella with a wild type control strain PAK used each time to ensure validity of the manipulation.
Statistical analysis
R statistical software package (V. 3.0.2, Vienna, Austria) was used to calculate descriptive statistics and perform univariate tests. P-values are the result of Fisher’s exact tests, t-tests or Mann-Whitney tests, as appropriate. Multivariate analysis was performed using logistic regression to assess the effects of potential predictors of SS when controlling for age, source of the bacteremia and total number of comorbidities.
Results
During a 20-month period, 101 patients had positive blood cultures for P. aeruginosa. After exclusions, data from 75 patients and their respective bacterial isolates were included in the analysis. Based on chart reviews and application of the definitions, 25/75 patients were classified as having poor outcomes (septic shock or death within a 7-day period, referred to as the SS group in later sections) and 50/75 in a no shock group (NSS). The mortality in the SS group was 64% versus 6% in the NSS group. The overall mortality for all patients at 30 days was 25%.
Host factors
Univariate analysis.
(Table 1) The mean age of patients in the SS group was 62.5 years and NSS group 54.1 years (p = 0.014). There were no statistically significant differences between the 2 groups in host factors such as WBC count, immunosuppression or neutropenia or both. Comorbidities such as cancer, burns, kidney disease, diabetes mellitus, gastrointestinal diseases, SOT, cardiovascular disease did not appear to influence the occurrence of SS. In contrast, the site of infection showed a statistically significant influence on the development of SS. Nine of the 16 (56.2%) patients who had pneumonia as the source of Pab developed SS whereas 16 out of 59 (27.1%) patients with all other sources, developed SS (p = 0.038).
Treatment
The effect of treatment factors was analyzed in a univariate analysis (Table 2). There were no significant differences in the time of receipt of effective antibiotic(s), the percentage of patients receiving treatment with ineffective antibiotics within the first 24 hours, the occurrence of MDR P. aeruginosa or duration of bacteremia between the SS group and the NSS group.
Bacterial factors
The genes lasB, encoding elastase, exoA, encoding exotoxin A and plcH, encoding the hemolytic phospholipase of P. aeruginosa, were present in 100% of both SS isolates and NSS isolates thus their effect on outcomes could not be ascertained. Other bacterial factors such as twitching motility, total proteolytic activity which represents the combined actions of at least 3 known proteases [32], were not statistically significant determinants of SS. Since all strains from patients with or without SS carried the exoS or exoU gene, there was no control group to examine whether the occurrence of exoS or exoU was associated with a high rate of SS. Thus, we examined whether one or the other gene by itself was associated with SS. There was no association of these 2 individual genotypes with the occurrence of SS (Table 3).
Bacterial motility
P. aeruginosa displays a single polar flagellum which is essential for virulence in animal burn wounds [24, 33]. Surprisingly, 8/75 patients had BSI with non-motile P. aeruginosa isolates, 6 of whom developed SS (75%) p = 0.014 (Table 3). All 8 non-motile isolates were examined by electron microscopy and all, but one, lacked a flagellum (Table 4 and Fig 1). In the SS group (6 non-motile isolates), 2 isolates synthesized flagellin protein by Western blotting and one of these had a nonfunctional flagellum as noted on electron microscopy, presumably due to a mutation(s) in a motor or chemotaxis gene.
Pyocyanin production
On visual examination of the strains on Luria agar, we noted that several patients were infected with strains that produced large amounts of pyocyanin. Most of these were isolated from patients who developed SS, however the median values for pyocyanin production of the all isolates from both groups of patients were not significantly different, (5.8 ug/ml for SS isolates versus 3.5ug/ml for NSS isolates (p = 0.189). Since pyocyanin production was a continuous variable, a Strip plot of pyocyanin production versus shock status was constructed (Fig 2). This plot showed a clear break in the data, with 5/6 (83%) of patient isolates that produced >18 ug/ml of pyocyanin causing SS, versus 20/69 (29%) of isolates that produced <18ug/ml (p = 0.014) (Table 3 and Fig 2).
The rate of SS was 83% among 6 subjects who had a pyocyanin level > 18 ug/ml. SS, septic shock or death within a 7-day period following P. aeruginosa bacteremia; NSS, no septic shock or death within 7-day period following P. aeruginosa bacteremia.
Motility and pyocyanin production
Since non-motility and high pyocyanin production were associated with SS, the concordance, if any, between these two factors was examined and is shown graphically in Fig 3. There was a statistically significant correlation between non-motility and low pyocyanin production (p = 0.02). All non-motile isolates produced less than 7 ug/ml of pyocyanin, most producing <2ug/ml. Thus, these microbial attributes were independent risk factors for the development of SS.
Multivariate analysis
In the univariate analysis, 4 factors emerged as being significant; age, pneumonia, non-motility and high pyocyanin production. A multivariate analysis, controlling for age and number of comorbidities was therefore performed (Table 5). The small sample size precluded a multivariate analysis controlling for individual comorbidities. Age remained a risk for SS, P = .048. Pneumonia was marginally predictive of SS, OR = 3.2, 95% CI = [.988, 10.8], p = .054. The analysis also indicated that the OR for development of SS with a non-motile isolate was 6.8, 95% CI = (1.37, 51.5), p = 0.030 and that for pyocyanin values >18ug/ml, it was 16.9, 95% CI = [2.27, 360], P = .017 (Table 5). Due to the small sample size, we could not control for all factors in a multivariate analysis and hence we performed two more analysis controlling for age and pneumonia and separately looking at pyocyanin production and non-motility due to the inverse correlation between the two. Age, pneumonia and pyocyanin were examined in the first model. Age and high pyocyanin remained as risk factors. Each year of age increased the odds of death by 4%, age: OR = 1.04, CI = [1.00, 1.07], p = .047, pneumonia: OR = 3.0, CI = [.868, 10.7], p = .082, pyocyanin>18: OR = 16.0, CI = [2.05, 351], p = .021. Thus, pneumonia was marginally predictive of SS (p = 0.082). The second model, included age, pneumonia and non-motility; age: OR = 1.03, CI = [.995, 1.06], p = .117, pneumonia: OR = 3.0, CI = [.873, 10.5], p = .080, non-motility: OR = 6.2, CI = [1.19, 47.1], p = .041. Every year of age increased the risk of SS by 3% and once more pneumonia was marginally significant. High pyocyanin production and non-motility each remained strong independent risk factors for the development of SS during Pab and were the only virulence determinants among those we examined that carried an increased risk of SS or early death.
Discussion
The purpose of this study was to examine the role of virulence factors of P. aeruginosa in outcomes of Pab. Our data support a role for high pyocyanin production and non-motility of infecting strains in affecting or predicting outcomes in Pab.
The roles of the many virulence factors of P. aeruginosa have been examined in studies of different mouse models of infection with the general conclusion that P. aeruginosa‘s virulence is multifactorial and often dependent on the primary site of infection [10–12]. Human studies to confirm any of these roles, particularly in bacteremia are few. However, during the last 2 decades the T3SS has been implicated in poor outcomes in both Pab and pneumonia in humans [16, 18, 19, 34]. The presence of the T3 secretion phenotype was correlated with poor outcomes in patients with lung infections or bacteremia. A study that included only bacteremic patients, examined the expression of exoU and exoS, and implicated both major T3 secreted toxins in death [18]. More recently a larger multicenter study of Pab performed an analysis of the role of strains carrying exoU and concluded that ExoU may be responsible for deaths occurring in 24–72 h but not for total 30 day mortality [19]. Thus, there appears to be mounting evidence in humans that the ExoU protein plays a role in some deaths due to Pab. Our data do not contradict these findings but add to the existing literature. Again, sample size in our study may have precluded the identification of the role of these genes in early deaths.
Pyocyanin, a phenazine pigment produced by P. aeruginosa, has long been suspected to play a role in the pathogenesis of P. aeruginosa infections but supportive evidence has been lacking in humans. Our findings that high pyocyanin production in vitro, may be predictive of poor outcomes is consistent with work done on this “toxin”. Pyocyanin demonstrates toxic properties towards cells mediated through oxidative stress and the generation of reactive oxygen species [35]. One very important relevant effect is the ability of pyocyanin to cause accelerated neutrophil apoptosis in the lungs resulting in impaired bacterial clearance and significantly lower concentrations of potent neutrophil chemokines [36]. Next, there are animal data that demonstrate the toxic potential of this molecule or related phenazines to the lung as well as their lethal potential in mice [37]. Pyocyanin producing strains produced extensive lobar pneumonia whereas, their isogenic mutants deleted of a gene in the biosynthetic pathway caused mild lung disease. Thus, this molecule in addition to being toxic to the host serves to evade neutrophil. The issue may be raised that these poor early outcomes may not be due to pyocyanin but rather the expression of exoU. However, none of the high pyocyanin producers carried the exoU gene. In fact, it appears that ExoU producing isolates of P. aeruginosa actually produce low amounts of pyocyanin [13].
The most unexpected result from this study was the association of poor outcomes with non-motile P. aeruginosa isolates especially since motility is essential for virulence in the burn wound model of P. aeruginosa infection [24, 33]. This seemingly paradoxical observation is however supported by research on the role of motility in phagocytosis and killing of P. aeruginosa. The polymorphonuclear leucocyte is the first line defense against P. aeruginosa [38] through non-opsonic phagocytosis which is dependent of the presence of a flagellum [39]. However studies, recently reported, suggest that it is not the flagellum but flagellar motility that is required [40], since the loss of motility, independent of the presence of the flagellum confers P. aeruginosa with about 100 fold resistance to phagocytosis by neutrophils, macrophages and dendritic cells [40]. Adding to the phagocytic defect, it has now been shown that the absence of flagellar motility results in another neutrophil defect, the inability to release neutrophil extracellular traps (NETs) an alternative mechanism to phagocytosis that is used for killing microbes extracellularly via a DNA scaffold associated with neutrophil granule components [41]. However, we hypothesize that even if there is neutrophil dysfunction, some other virulence factor (s) e.g. ExoU mediates actual toxicity to the host, leading to poor outcomes, since the non-motile isolates produced low amounts of pyocyanin.
Thus, we have defined two other microbial factors that are predictive of poor outcomes in Pab, high pyocyanin production and the absence of motility. However, our study has several shortcomings. The small sample size may not have allowed to us identify certain other risk factors for poor outcomes that have been identified in previous studies, such as adequacy of antibiotic therapy, neutropenia/immunosuppression. In addition, we did not examine the phenotypic expression of the T3SS to ascertain whether there were differences in gene expression between strains from SS and non-SS patients. Another caveat should also be stated, our strain evaluation was done in vitro thus whether pyocyanin is produced in high amounts in-vivo is unknown. Despite these shortcomings, the identification of these two factors in such a small sample size suggests that they play extremely important roles or serve as markers for strains that result in poor outcomes. The common effect of these 2 phenotypes can be summed up as mechanisms to evade phagocytic killing by P. aeruginosa, the first line of defense in a host. Larger studies to confirm these findings, especially the role of pyocyanin, are warranted, as progress is being made in the development of anti-pyocyanin compounds [42]. It should however be pointed out that the events that occur in blood during Pseudomonas bacteremia are complex and we may just be observing markers for poor outcomes, as exposure of P. aeruginosa to blood results in the induction and repression of a large number of putative virulence pathways [43].
Supporting information
S1 Fig. Photo of PCR gene products for exoS, toxA, lasB and exoU genes electrophoresed through agarose gel containing ethidium bromide and visualized using UV light.
This is a representative DNA agarose gel run after PCR analysis of isolate 26–31. Multiple PCRs were run in order to evaluate all 75 isolates. PAK-wild type was the positive control strain for exoS, toxA, lasB, and plcH genes. PA-14 laboratory strain was the positive control for exoU, toxA, lasB, and plcH genes. The PCRs for exoS, toxA, lasB were run in the same reaction tube using primers for those genes, shown in lane 2–9. PCR reaction using plcH primers in lane 10–16. Lanes 1, 17, DNA ladder; lane 2, PAK-wild type strain; lane 3, PA-14 laboratory strain; lane 4–9, isolate 26–31; lane 10, PAK-wild type; lane 11, PA-14; lane 12–16, isolate 26–30. Gene size for each gene encoding a toxin: exoS (1361 bp); exoU (2063bp); toxA (1916bp); lasB (1496bp); plcH (2192bp).
https://doi.org/10.1371/journal.pone.0253259.s001
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S2 Fig. Photo of PCR gene products for plcH and exoU genes electrophoresed through agarose gel containing ethidium bromide and visualized using UV light.
This is a representative of the DNA agarose gel run after PCR analysis of isolate 26–31. PAK-wild type and PA-14 were the positive controls for plcH gene (see S1 Fig). PA-14 laboratory strain was the positive control for exoU gene. Lane 1 and 11, DNA ladder; lane 2, isolate 31 with a band for plcH gene; lane 3–10 PCR products of amplification of exoU gene; lane 3, Pak-wild type (no band corresponding to exoU); lane 4, PA-14; lane 5–10, isolate 26–31. Gene size for each gene encoding a toxin: exoS (1361 bp); exoU (2063bp); toxA (1916bp); lasB (1496bp); plcH (2192bp).
https://doi.org/10.1371/journal.pone.0253259.s002
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S3 Fig. Western blot analysis of flagellin production by 8 non-motile clinical isolates.
Lane1, isolate 79; lane 2 isolate 77; lane 3, isolate 62; lane 4, isolate 40; lane 5, isolate 35; lane 6, isolate 26; lane 7, isolate 16; lane 8, isolate 9; lane 9, PAK Δflic mutant; lane 10, PAK-fliD mutant overexpressing flagellin; lane 11, Pharmacia low-molecular-mass (kilodaltons) markers. Flagellin stains demonstrate different molecular weights due to the fact that there are 2 major flagellin types A and B that have different molecular weights and different degrees of glycosylation. The antibody used detects both types of flagellins.
https://doi.org/10.1371/journal.pone.0253259.s003
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S1 Table. Primers used for detection of genes encoding the major Pseudomonas toxins: exoS, toxA, lasB, plcH, and exoU.
Primers were designed based on the published gene sequences from Pseudomonas Genome Database and synthesized by Geno-Mechanix, Gainesville, Florida.
https://doi.org/10.1371/journal.pone.0253259.s004
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Acknowledgments
Dan Neal, M.S, Statistician at the Department of Neurosurgery, University of Florida, performed the Statistical analysis for this study.
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