Peer Review History
| Original SubmissionSeptember 24, 2025 |
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Dear Dr. Gores, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Dec 04 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
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Kind regards, Pavel Strnad Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1.Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Thank you for stating the following financial disclosure: “This work was supported by NIDDK-funded grant DK124182 (GJG), the NIDDK-funded Optical Microscopy Core of the Mayo Clinic Center for Cell Signaling in Gastroenterology (P30DK084567), and the Mayo Clinic, Rochester.” Please state what role the funders took in the study. If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." If this statement is not correct you must amend it as needed. Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf. 3. Please expand the acronym “NIDDK” (as indicated in your financial disclosure) so that it states the name of your funders in full. This information should be included in your cover letter; we will change the online submission form on your behalf. 4. Thank you for stating the following in your Competing Interests section: “Disclosures: The authors have no financial or personal disclosures relevant to this manuscript.” Please complete your Competing Interests on the online submission form to state any Competing Interests. If you have no competing interests, please state "The authors have declared that no competing interests exist.", as detailed online in our guide for authors at http://journals.plos.org/plosone/s/submit-now This information should be included in your cover letter; we will change the online submission form on your behalf. 5. We note that your Data Availability Statement is currently as follows: Data supporting the findings of this study are available within the article and in the supplementary information. Please confirm at this time whether or not your submission contains all raw data required to replicate the results of your study. Authors must share the “minimal data set” for their submission. PLOS defines the minimal data set to consist of the data required to replicate all study findings reported in the article, as well as related metadata and methods (https://journals.plos.org/plosone/s/data-availability#loc-minimal-data-set-definition). For example, authors should submit the following data: - The values behind the means, standard deviations and other measures reported; - The values used to build graphs; - The points extracted from images for analysis. Authors do not need to submit their entire data set if only a portion of the data was used in the reported study. If your submission does not contain these data, please either upload them as Supporting Information files or deposit them to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of recommended repositories, please see https://journals.plos.org/plosone/s/recommended-repositories. If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. If data are owned by a third party, please indicate how others may request data access. 6. If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. Additional Editor Comments: As you can see, both reviewers appreciated your work, I am looking forward to the revised version! [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? Reviewer #1: No Reviewer #2: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: No Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: This study attempts to dissect the role of IL-17A in cholestatic liver injury using a DDC-induced mouse model and proposes an intriguing counterintuitive role for IL-17A as anti-fibrogenic, via suppression of the LIGHT(TNFSF14) axis in Th1 CD4+ T cells. The hypothesis is original, and the data volume is substantial. However, several critical flaws exist that undermine the rigor, clarity, and significance of the work. Major Criticisms 1. Used model possesses critical limitations that undermine translational relevance. The study exclusively uses the DDC model, which does not truly model human cholangiopathies like PSC or PBC. It primarily induces bile duct proliferation and periductal fibrosis, but lacks the chronicity and immune features (e.g., autoantibodies, IBD comorbidity) found in PSC. No validation in a second model (e.g., BDL, Mdr2-/-) is a serious oversight, especially since the authors make clinical inferences about anti-IL-17 therapy in PSC. The discussion acknowledges this limitation, but this should not just be noted — it weakens the core claims of the manuscript. 2. In fact, LIGHT mechanism is not directly demonstrated in vivo. LIGHT expression is shown to be upregulated in CD4+ Th1 cells in flow cytometry, and LIGHT can activate HSCs in vitro — but no causal link is shown in vivo. There is no use of LIGHT-deficient mice, blocking antibodies, or neutralization strategies. No functional experiment demonstrates that the fibrosis seen in Il-17a-/- mice is actually due to LIGHT — this is speculative at best. A correlative upregulation is not a mechanistic demonstration. 3. IL-17A is known to have complex, context-dependent roles in mucosal immunity and fibrosis. The authors cite this but still oversimplify by declaring IL-17A as "restraining" fibrosis via LIGHT regulation. Th1 skewing is assumed based on increased LIGHT in Th1 cells, but no cytokine profile (e.g., IFNγ, IL-2) is provided to support Th1 dominance. Other CD4+ subsets (e.g., Th17, Treg) are shown to express LIGHT, but the authors arbitrarily focus on Th1 cells. 4. Although CyTOF is used to generate 28 clusters, the analysis is descriptive and shallow: no statistical clustering (e.g., PCA, UMAP, cluster-specific testing), no deep phenotype mapping beyond broad lineage categories, no correlation between specific clusters and fibrosis severity. 5. Many key figures (especially immunostaining) are poorly quantified or not quantified at all. No available description of the sample number per experiment per quantification. No scoring system or blinded analysis is mentioned for fibrosis, desmin, CK19. Quantification of Sirius Red is questionable — was this done per portal area, per field, or whole slide? Quantitative rigor is lacking throughout the manuscript. 6. Key Controls are missing such as: No IL-17F single KO or IL-17A/F double KO controls used in key experiments. No isotype controls shown in flow cytometry for LIGHT or transcription factor staining. No cell-specific knockout models used to prove LIGHT source or action. No cytokine stimulation of CD4+ T cells to show IL-17A suppresses LIGHT. Reviewer #2: The study by Kitagataya et al., titled “Genetic Ablation of IL17A Augments Fibrosis in a Mouse Model of Cholestatic Liver Injury,” is highly comprehensive and methodologically robust. The concept that this pathway influences fibrosis by inhibiting LIGHT and might have potential for future therapeutic applications. From structural perspective, the manuscript is fluent, and it is clear that the authors have provided key details regarding materials and methods. However, several aspects could be improved for better clarity and scientific rigor. The experimental design is generally strong, with well-connected experiments that illuminate the underlying mechanisms. Nonetheless, specific key findings should be further investigated and/or discussed. My specific comments are provided below: 1- In some analyses, precise statistical evaluations are missing In Figure 1D–E, statistical comparisons are shown for WT vs WT-DDCfed and Il17A KO vs IL17A-DDCfed mice; however, it is unclear whether there is also a statistical difference between WT-fed and KO-fed mice. Additionally, in Figure 1B, the statistical significance is not clearly indicated. 2- Most of the figures are difficult to read due to small font sizes and low image resolution, making it challenging to interpret the data. There are general resolution problems in the microscopic images. For instance, in Figure 1B, CK19 staining is barely visible, and the scale bars are inconsistent. A similar issue is observed in Figure 2C and several other figures. In some figures (e.g., Figure 5A–B, Figures S2–S3), the legends and labels are also hard to read. 3- Previous studies have shown that LIGHT enhances TGF-β production and fibrotic gene expression via the LTβR–NF-κB pathway. However, this study does not examine whether LIGHT exerts its effect through this signaling route. similarly, it remains unclear whether the STAT1 pathway was investigated, although it could be mechanistically relevant. 4- Furthermore, the observation that LIGHT elevation shifts polarization toward the T1 phenotype raises questions about which cytokines may mediate this process. For example, were IFN-γ or other related cytokines analyzed? 5- The discussion section would benefit from a more integrative approach one that connects these possible mechanisms and situates the findings within the broader context of LIGHT-related studies. Specifically, the authors should discuss how T-cell polarization in the liver may be influenced by LIGHT, and how the NF-κB and STAT pathways could be involved in these interactions. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Dear Dr. Gores, Please submit your revised manuscript by Feb 23 2026 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Pavel Strnad Academic Editor PLOS One Journal Requirements: If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author Reviewer #1: All comments have been addressed Reviewer #2: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions??> Reviewer #1: Yes Reviewer #2: Partly ********** 3. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: Yes Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: The authors have largely addressed the comments raised during peer review. The revised version clarifies key aspects of the proposed mechanism and more appropriately frames the findings within the limitations of the experimental approach. The conclusions are generally consistent with the data presented. However, several additional points could further strengthen the manuscript, although are not critical for acceptance. First, the absence of in vivo loss-of-function experiments targeting LIGHT (e.g., antibody-mediated blockade) is understandable given practical limitations; while such experiments would provide stronger mechanistic support, their omission does not fundamentally compromise the main conclusions, which are presented in a suitably cautious manner. Second, IL-17F is evaluated only at the transcript level. As mRNA expression does not necessarily reflect protein abundance and IL-17F could theoretically contribute to compensatory signaling, this limitation should be acknowledged more explicitly. Nevertheless, it does not materially alter the interpretation of the findings. In addition, it would be important to clearly state as conclusion that the reported effects are specific to the DDC-induced cholestasis model and should not be generalized to other forms of liver injury or fibrosis without further validation. Finally, for clarity and transparency, it would be appropriate for the authors to explicitly state the number of biological replicates (n) in each figure legend. Overall, I find the revision acceptable, and the points above should be considered minor recommendations rather than prerequisites for acceptance. Reviewer #2: The authors have addressed the majority of the reviewers’ comments, and the study appears scientifically sound. The presented data support the main conclusions. Overall, I consider the work suitable for acceptance after minor revisions. Nevertheless, a few points could further strengthen the manuscript: 1. The authors discuss their observations on LIGHT⁺ Th1 T cells in the context of DDC diet–induced cholestatic liver injury and fibrosis. However, the mechanistic aspects underlying these observations remain relatively limited. A more detailed discussion of the potential cellular and molecular mechanisms by which LIGHT⁺ Th1 T cells may contribute to fibrosis would substantially strengthen the Discussion. 2. Gene names are inconsistently formatted throughout the manuscript (e.g., COL1a1 on page 10). Please ensure consistent and correct gene nomenclature according to standard conventions. 3. The resolution of some figures remains suboptimal. In particular, Figure 5b would benefit from higher resolution to improve readability. In Figure 3, the immunofluorescence signals appear weak and are difficult to distinguish. Improving image contrast and resolution, or providing higher-magnification images, would help readers better appreciate the findings. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] To ensure your figures meet our technical requirements, please review our figure guidelines: https://journals.plos.org/plosone/s/figures You may also use PLOS’s free figure tool, NAAS, to help you prepare publication quality figures: https://journals.plos.org/plosone/s/figures#loc-tools-for-figure-preparation. NAAS will assess whether your figures meet our technical requirements by comparing each figure against our figure specifications. |
| Revision 2 |
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Genetic Ablation of Interleukin 17A Augments Fibrosis in a Mouse Model of Cholestatic Liver Injury PONE-D-25-52210R2 Dear Dr. Gores, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support . If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Pavel Strnad Academic Editor PLOS One Additional Editor Comments (optional): Thank you for your great work! Reviewers' comments: |
| Formally Accepted |
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PONE-D-25-52210R2 PLOS One Dear Dr. Gores, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS One. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Pavel Strnad Academic Editor PLOS One |
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