Peer Review History
| Original SubmissionMarch 30, 2025 |
|---|
|
Dear Dr. Chen, plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Rajagopalan Srinivasan Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please note that PLOS ONE has specific guidelines on code sharing for submissions in which author-generated code underpins the findings in the manuscript. In these cases, we expect all author-generated code to be made available without restrictions upon publication of the work. Please review our guidelines at https://journals.plos.org/plosone/s/materials-and-software-sharing#loc-sharing-code and ensure that your code is shared in a way that follows best practice and facilitates reproducibility and reuse. 3. Thank you for stating in your Funding Statement: “The author(s) disclosed the receipt of the following financial support for the research, authorship, and/or publication of this article: This work was supported by the Science and Technology Research and Development Program of China National Railway Corporation Limited (Grant No. K2024T002).” Please provide an amended statement that declares *all* the funding or sources of support (whether external or internal to your organization) received during this study, as detailed online in our guide for authors at http://journals.plos.org/plosone/s/submit-now. Please also include the statement “There was no additional external funding received for this study.” in your updated Funding Statement. Please include your amended Funding Statement within your cover letter. We will change the online submission form on your behalf. 4. We note that your Data Availability Statement is currently as follows: [Add Data Availability statement here] Please confirm at this time whether or not your submission contains all raw data required to replicate the results of your study. Authors must share the “minimal data set” for their submission. PLOS defines the minimal data set to consist of the data required to replicate all study findings reported in the article, as well as related metadata and methods (https://journals.plos.org/plosone/s/data-availability#loc-minimal-data-set-definition). For example, authors should submit the following data: - The values behind the means, standard deviations and other measures reported; - The values used to build graphs; - The points extracted from images for analysis. Authors do not need to submit their entire data set if only a portion of the data was used in the reported study. If your submission does not contain these data, please either upload them as Supporting Information files or deposit them to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of recommended repositories, please see https://journals.plos.org/plosone/s/recommended-repositories. If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. If data are owned by a third party, please indicate how others may request data access. 5. Thank you for stating the following in the Acknowledgments Section of your manuscript: “The author(s) disclosed the receipt of the following financial support for the research, authorship, and/or publication of this article: This work was supported by the Science and Technology Research and Development Program of China National Railway Corporation Limited (Grant No. K2024T002).” We note that you have provided additional information within the Acknowledgements Section that is not currently declared in your Funding Statement. Please note that funding information should not appear in the Acknowledgments section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. Please remove any funding-related text from the manuscript and let us know how you would like to update your Funding Statement. Currently, your Funding Statement reads as follows: “The author(s) disclosed the receipt of the following financial support for the research, authorship, and/or publication of this article: This work was supported by the Science and Technology Research and Development Program of China National Railway Corporation Limited (Grant No. K2024T002).’ Please include your amended statements within your cover letter; we will change the online submission form on your behalf. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? Reviewer #1: Partly Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: N/A Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: No Reviewer #2: No ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: General Comment: The paper does a detailed analysis of over 150 railway accidents to identify contributing risk factors to those accidents as well as quantify their coupling relationships. These factors are then grouped into four broad categories including personnel, equipment, environmental and management factors. Using this categorization, an NK risk coupling model is then constructed to compute coupling probabilities and interaction information (T-values) to analyse the coupling relations/interactions between various risk factors towards accident causation. Building on this, the paper develops a network, where the risk factors are treated as nodes and the communications (causal/influence) relationships between various risk factors considered as edges in order to study how risks interact and propagate. Through this network, closeness centrality (in degree: which risks are likely to be impacted and outdegree: which risks are likely to cause others) and betweenness centrality calculations are done to make quantitative assessments of the interactions. Importantly, these centrality measures are then corrected using coupling information derived from the NK model. Based on this approach, the paper identifies leading contributing factors to railway accidents and suggests data driven measures to prevent such accidents. Thus, it is a valuable contribution to the field. However, the paper cannot be accepted in its current form, and needs improvements. Major Issues/Suggestions for Improvement: 1) The paper specifically needs improvement in the methodology section where many things are not clearly mentioned. For instance, i) how was the literature research and data collection done to search for accident reports? Was any database searched or was any other approach adopted? ii) How was the “directed” network constructed? There is no mention about how the directionality was obtained [Figure 7] from the adjacency matrix. The details need to be there. iii) There is no explicit mention of how the NK model was integrated into the complex network for the purpose of correction? While it does mention that the risk coupling values were used to adjust the proximity and intermediary centrality of the risk nodes, how? The reader would benefit if mathematical formulation of the same is provided. iv) What does reachability mean in the context of the current study? It is not clearly defined. v) If possible, the essence of closeness centrality and betweenness centrality may be illustrated with the help of a representative diagram so as to benefit readers who are not acquainted with network analysis. 2) It would benefit the reader if the literature cited in the introduction section is categorized into themes for instance fault tree analysis based methods, hazardous materials transportation, dynamic risk analysis models, and so on. Currently, the placement of each method is random. 3) “This study employs the N-K model to analyze railway accident cases, calculating the coupling values between railway safety risk factors and conducting quantitative analyses of coupling risk. Through risk accessibility and network node centrality analyses, the mechanisms underlying risk factors are explored. Node centrality is then adjusted based on the coupling values obtained from the N-K model to identify the key risk factors.” Some terms appear for the first time such as coupling values, coupling risk, network node centrality. It would benefit the reader if any conceptual clarity is provided about these terms in the introduction itself. 4) The terms “interactions” and “couplings” are used a bit loosely. Is there any distinction between the two? 5) The discussion/conclusion is more or less a summary of key results. It would enrich the contributions of the paper if the current results/insights regarding key and leading risk factors are discussed in the light of existing literature. For instance, how are the findings of the current work in line with the works cited in the introduction? Do the insights supplement/complement or contradict the already known findings. How do these advance what is already known. Other comments: 6) Please ensure key terms that are used in the paper are clearly defined in the context of the paper. 7) “Step 2: Risk factor change probability p.... Calculate.” A bit ambiguous and should be rephrased for clarity. 8) “For example, when the equipment factor occurs, the risk probability of the factor changing is denoted as p..i. The formula is as follows:” Should it be p.i.. ? 9) Formatting: There is always a space before “(“ and there is always a space after “,” There are multiple instances in the paper where this is not followed. For instance, “CC(i)denotes” and “bjk(i)” and “a3(Unsafe Behaviors)” and so on look congested.Likewise, the content is without spaces, for instance in Table 5 “T4(a, b, c, d)=0.756” there is no spacing between the text. Please go through the paper carefully and address the formatting issues. Reviewer #2: Thank you for giving the opportunity to review the article titled "Investigating the Coupling Relationships of Railway Safety Risks Using the N-K Model and Complex Network Theory". Below is a review summary. The manuscript integrates N-K model with complex network theory to investigate coupling in railway safety risk. The use of quantitative coupling values provides an objective foundation for safety analysis. However, the analysis lacks a temporal or dynamic dimension — the coupling evolution over time is not modeled. Authors acknowledge this in their conclusion but it's a major gap for systems that change rapidly. Also, the model assumes uniform weight for all nodes and coupling interactions — no mention of adjusting weights based on severity or frequency of accidents. The study doesn’t validate the identified key risk factors against real-world intervention outcomes (e.g., did addressing factor a7 reduce accidents?) It is unclear whether this approach generalizes to other railway systems (e.g., outside China) or different transportation domains. Addressing above concerns through a proper discussion or analysis will enhance the acceptability of the manuscript for real cases. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org . Please note that Supporting Information files do not need this step. |
| Revision 1 |
|
Dear Dr. Chen, Thank you for submitting your manuscript to PLOS ONE. We’re pleased to inform you that your manuscript can be accepted for publication once the revisions indicated by Reviewer 1 have been addressed. Please submit your revised manuscript by Oct 11 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org . When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols . Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols . We look forward to receiving your revised manuscript. Kind regards, Rajagopalan Srinivasan Academic Editor PLOS ONE Journal Requirements: 1. If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. 2. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author Reviewer #1: (No Response) Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions??> Reviewer #1: Yes Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: N/A Reviewer #2: I Don't Know ********** 4. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy Reviewer #1: No Reviewer #2: No ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: The authors have addressed the comments. I have a few minor comments: 1. While the clarification of the following comment “How was the “directed” network constructed? There is no mention about how the directionality was obtained [Figure 7] from the adjacency matrix. The details need to be there.” has been provided in the comments document, it has not been included in the manuscript (even though adjacency matrix has now been included). It would be helpful to include a few sentences in the manuscript as well. 2. “The centrality values of the risk factors are presented in Table 6”. Table 6 is an adjacency matrix. Do you mean Table 7? 3. Figures 7 and 8 can be replaced by a single figure because they are the same except for the color of two nodes. A single figure with different colors for the two referred nodes may be used. 4. Table 8 has something written in a language that is not English. Please replace it with English text. 5. In the “Construction of the N-K Risk Coupling Model for Railway Systems” section, the headings of step 1 and step 2 convey the same meaning. Please modify Step 2 heading appropriately. Currently, Step 1 reads “Calculation of the Coupling Probability p for Risk Factors.” while Step 2 reads “Risk factor coupling probability p.... Calculate”. Reviewer #2: The concerns raised in the previous evaluation are addressed in the revised version. Authors have highlighted the limitation of the study in more detail for real scenarios. ********** what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy Reviewer #1: No Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/ . PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org |
| Revision 2 |
|
Investigating the Coupling Relationships of Railway Safety Risks Using the N-K Model and Complex Network Theory PONE-D-25-17142R2 Dear Dr. Chen, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support . If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Rajagopalan Srinivasan Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
|
PONE-D-25-17142R2 PLOS ONE Dear Dr. Chen, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Rajagopalan Srinivasan Academic Editor PLOS ONE |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .