Peer Review History
| Original SubmissionFebruary 15, 2024 |
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PONE-D-24-06208Benthic Foraminifera as bio-indicators of natural and anthropogenic stressesPLOS ONE Dear Dr. Dache, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Jun 07 2024 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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If you are unable to adhere to our open data policy, please kindly revise your statement to explain your reasoning and we will seek the editor's input on an exemption. Please be assured that, once you have provided your new statement, the assessment of your exemption will not hold up the peer review process. 5. Please include your tables as part of your main manuscript and remove the individual files. Please note that supplementary tables (should remain/ be uploaded) as separate ""supporting information"" files Additional Editor Comments: Dear Authors, two external reviewers have now assessed your manuscript I have received the reports from referees on your manuscript, "Benthic Foraminifera as bio-indicators of natural and anthropogenic stresses", providing the comments that are reported below. As you can see, they both found your study needs important modifications. They identified a number of issues that would require careful revision before this paper is recommendable for acceptance. Based on the reviewers' and my own assessment, I'm thus here inviting you to take all of these comments into careful consideration and to modify your manuscript according to the provided constructive suggestions. I will then be happy to receive and further examine your revised version together with a point-by-point reply to each comment by myself and each reviewer, where you will need to explain any changes done to a particular piece of text, or include supported and convincing counterarguments to any points you may disagree with I'm confident you will find the present comments and suggestions relevant and useful to improve your work and I'm thus looking forward to hearing back form you by the due time. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: No ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: No Reviewer #2: No ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: See the attached Word copy of your ms. It is edited using Track Changes. The topic is well treated but the language needs some clarification. I did this for all sections except the Summary and Conclusions which needs to be rewritten to clarify and eliminate the wordiness. Reviewer #2: Comments: Dachè et al made a sincere effort to understand the response of benthic foraminifera in the coastal settings of Roscoff Aber Bay. The manuscript is poorly drafted and needs a significant improvement. I suggest authors to overhaul the result and discussion section. First start with inter-season, then move to intra-season details. Although, authors have generated a large number of dataset from the region but fails to provide a comprehensive finding and not able to marks the relationship between benthic foraminifera abundance and diversity with ambient ecological parameters. My comments follow: Line 21: remove “good”. Line 79-81: ‘It is……….its salinity’. Provide references. Line 103: remove ‘temporal’ Line 123: Mark the freshwater stream in figure 1 clearly. Line 137-138: It is hard to distinguished that authors used only living benthic foraminifera or total benthic foraminifera population including dead shells (in the top 5 cm). Needs to mention clearly. Line 157-160: Please provide accuracy of conductivity, pH and oxygen measurements. Line 187: Sulfanilic acid was used as the elemental standard. Why acid was used as a standard for sediment samples, where standard and samples values deviate with a large difference. Line 206-207: ‘4% formalin.....foraminiera’. cite reference. Line 232: put space between % and area. Line 252: ‘pH….sites. Remove the sentence. 7.2 to 8.8 is not a little variation by any mean. Results: Results should be written first inter-season wise, followed by intra-seasonal variations. It is very hard to follow it in its current form. Line 269: ‘Oxygen concentration was highest in November’? at which station? All of them? If yes, then mention. Also provide values for it rather than writing highest and lowest. Correct it throughout the result section. Line 287: δ13C, δ15N, δ34S. Make mass value superscript. Line 309-311: The δ34S………seasons. It does not belong to result section. Remove it. Line 430: Micohabitats section fails to provide any details of benthic foraminifera microhabitat. It is just full of previously published information. Line 541: H. germanica. Write it in Italics. Line 542: Q. seminula. Write it in Italics. Line 545: Q. seminula. Write it in Italics. Line: Discussion section read redundant and need complete overhauling. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Jere H. Lipps Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.
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| Revision 1 |
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Benthic Foraminifera as bio-indicators of natural and anthropogenic conditions in Roscoff Aber Bay (Brittany, France) PONE-D-24-06208R1 Dear Dr. Dache, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. If you have any questions relating to publication charges, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Marcos Rubal García, PhD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #2: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #2: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #2: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #2: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #2: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #2: (No Response) ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #2: Yes: Dharmendra Pratap Singh ********** |
| Formally Accepted |
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PONE-D-24-06208R1 PLOS ONE Dear Dr. Daché, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset If revisions are needed, the production department will contact you directly to resolve them. If no revisions are needed, you will receive an email when the publication date has been set. At this time, we do not offer pre-publication proofs to authors during production of the accepted work. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few weeks to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Marcos Rubal García Academic Editor PLOS ONE |
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