Peer Review History
| Original SubmissionFebruary 10, 2022 |
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PONE-D-22-04137Incidence, risk factors, and prognosis of acute kidney injury in hospitalized patients with acute cholangitisPLOS ONE Dear Dr. Park, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Apr 24 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. 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(Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Dear Editor, Thank you for the privilege of reviewing this manuscript. This is a well designed and nicely written study that describes the statistics of AKI in acute cholangitis patients. I suggest this manuscript to published in its present form. Best regards, Reviewer #2: This is an interesting paper for several points: the use of KDIGO criteria for AKI, number of patients and the long follow up after discharge. Authors are just kindly requested to move AKI definition to the introduction Reviewer #3: In this study, Lee et al used a retrospective cohort design to investigate the incidence, risk factors, and prognosis of acute kidney injury in 1438 patients hospitalized with acute cholangitis (AC) in a tertiary care center () from January 2011 to December 2017. The investigators found that age, history of hypertension at baseline, AC severity criteria (Tokyo Grade score, SIRS and qSOFA) were independent predictors of AKI in AC patients. They also report that AKI was independently associated with all-cause mortality, and they developed a prediction model for AKI in AC patients, that had good discriminant properties (C-statistic = 0.798) and the sensitivity and specificity of the scoring system at a cut-off of 1.9 were 70.1% and 77.4% respectively. The strengths of this study include access to high quality inpatient data in a large number of patients with AC to be able to answer the research question but there are several concerns that need to be addressed before this manuscript can be considered for publication. Major concerns 1. Variable selection for AKI prediction model. The authors mention using forward and backward stepwise procedures to select the predictors included in the prediction model. Can the authors comment on the reproducibility of these variable selection procedures? Would a different set of variables not be selected if this study was repeated in another sample? Perhaps deciding a priori to select variables known to be predictive of AKI based on prior data and fitting the model once may be produce a more reproducible model? Also, would be more advantageous to model age in a nonlinear fashion using restricted cubic splines? 2. Validation of prediction model. Did the authors use any methods to validate their prediction model such as cross-validation or bootstrapping? In the absence of any validation, can the authors comment on how this model would perform in another dataset? 3. Model calibration. The authors present AUROC values for discriminant analysis but it would be important to know if model calibration was also assessed. 4. Lag time for AKI diagnosis and Time to death. Can the authors describe if there was any lag time between study entry (on date of admission) and the date of AKI diagnosis? If so, please present the median and interquartile range. Also, if any such lag time exists for some patients, how was the time pre-AKI diagnosis modelled in the Cox proportional hazards models for all-cause mortality. Was that time attributed to unexposed person-time? Minor concerns 1. Figure 1. In the methods, patients were admitted between January 2011 and December 2017. The Figure says 2016. Please correct. 2. Figure 2. Please include the AUROC (95% CI) on the graph. 3. Figure 3. Please clarify what the time axis represents. Is it time from cohort entry to end of follow-up? 4. Table 2. It may be better to present the multivariable odds ratios for all the variables in the table. 5. Table 3. In order to make inferences about the frequency of severe AKI in the different Ac severity categories, it would be better to prevent the row percentages. 6. Discussion (page 10, paragraph 2). The percentages for AKI stages (56%, 28% and 16%) cannot be interpreted as AKI rates. Please revise. Also please ensure that all data presented in the discussion is also presented in the results. 7. Please clarify in the manuscript text what short-term and long-term mortality means. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: Tuncay Sahutoglu, M.D. Reviewer #2: No Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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Incidence, risk factors, and prognosis of acute kidney injury in hospitalized patients with acute cholangitis PONE-D-22-04137R1 Dear Dr. Park, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Mabel Aoun, MD, MPH Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-22-04137R1 Incidence, risk factors, and prognosis of acute kidney injury in hospitalized patients with acute cholangitis Dear Dr. Park: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Mabel Aoun Academic Editor PLOS ONE |
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