Peer Review History
| Original SubmissionSeptember 1, 2020 |
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PONE-D-20-27484 Identifying bedrest using waist-worn triaxial accelerometers in preschool children PLOS ONE Dear Dr. Buchowski, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please address all comments by the reviewer. Please submit your revised manuscript by Dec 17 2020 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Raffaele Ferri, MD Academic Editor PLOS ONE Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please ensure that you refer to Figure 3 in your text as, if accepted, production will need this reference to link the reader to the figure. 3. We note that you have stated that you will provide repository information for your data at acceptance. Should your manuscript be accepted for publication, we will hold it until you provide the relevant accession numbers or DOIs necessary to access your data. If you wish to make changes to your Data Availability statement, please describe these changes in your cover letter and we will update your Data Availability statement to reflect the information you provide. 4. Thank you for stating in your Funding Statement: "This research was supported by the National Institutes of Health (NIH) grants HL103620 and HL103561 from the National Heart, Lung, and Blood Institute and the Eunice Kennedy Shriver National Institute of Child Health and Development and the Office of Behavioral and Social Sciences Research: https://www.nih.gov/. Additional funds were provided by grants DK058404 and DK20593 from the National Institute of Diabetes and Digestive and Kidney Diseases: https://www.nih.gov. The REDCap Database was supported by TR000445 from the National Center for Advancing Translational Sciences: https://www.nih.gov/. WJH was supported by K23 HL127104 grant from the National Heart Lung and Blood Institute: https://www.nih.gov/. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." i) Please provide an amended statement that declares *all* the funding or sources of support (whether external or internal to your organization) received during this study, as detailed online in our guide for authors at http://journals.plos.org/plosone/s/submit-now. Please also include the statement “There was no additional external funding received for this study.” in your updated Funding Statement. ii) Please include your amended Funding Statement within your cover letter. We will change the online submission form on your behalf. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Authors have shared an interesting article about the validation of an adapted algorithm for identification and differentiation of bedrest and wake periods using wait-worm triaxial accelerometers. The work is well structured and includes comprehensive description of methodology and statistical analyses. My biggest concern regards to the fairness of the comparison approach with other methods, in particular to what respects to the omission of the role that the database variability effect might play on the results, possibly penalizing performance of the other methods. In effect, authors openly admit, and experimental results also confirm, that usage of the proposed DT(-Youth) algorithm on different age groups (in this case, preschool vs older children) does require reconfiguration, namely different values for the four parameters (block length, threshold, bedrest-start trigger, and bedrest-end trigger) guiding the decision algorithm. Given for example, the benchmarked Sadeh´s algorithm was probably developed based on data other than the Growing Right Onto Wellness dataset used in this study (meaning different subjects and signal characteristics), it is somehow expected that performance could drop when comparing it with an algorithm that was optimized for the mentioned dataset. A more fair comparison would be to use a third, completely independent dataset to all the involved algorithms in the comparison, to test the real generalization capabilities of each one. Authors should develop into this point, and at the very least include the issue into the discussion and address it as a possible limitation. Authors should also elaborate more on the specific differences between the current version of the DT algorithm proposed and the previously reported, here referred as DT-Youth. It is just about finding a different set of configuration parameters optimized for each targeted age group for the same algorithm? Or are the two methods intrinsically different? Necessity to reparametrize the algorithm on each case could be seen as an additional limiting factor. Apparently every potential user would have to run an optimization procedure similar to the one described by the authors to discover the optimal parameters for their specific local database, which seems rather unpractical, unless any general rule-of-thumb can be derived a priori to find an appropriate set. An additional point that requires further clarification is that one of the main reasons motivating this work is that, to the author´s knowledge, “no accelerometry-based algorithm validation studies in healthy preschool children have been reported” (lines 77-78). What are the reasons for which authors have opted not to include the work referenced in [9] into this discussion? Minor comments: Though Table 4 suggest that no abrupt differences exist in the balance of cases among the two categories considered (bedrest, wake), it would be nice to mention the exact amount of cases on the development and validation subsets, according to the gold standard, in this case, the expert’s classifications. If classes would result unbalanced then adding kappa to the reported list of performance statistics might be a better choice than accuracy, as kappa compensates for agreement due to chance, i.e. in case the a priori probability of one class if significantly bigger than the other. It would also allow comparison of the kappa agreement reported to evaluate the expert’s inter-scorer reliability. There is possibly a typo when referencing to Fig. 2 in line 334, which I think it should be Fig. 3 instead. In addition, I would suggest reconsidering Fig.3 in general and stick reporting to the Area Under to ROC Curve for the final optimum point for the different algorithms, as there is no much interest in reporting the intermediate values during the optimization process. Usually one reports ROC curves to compare different operating final points of an algorithm. Regardless, if decided to report (or display) the results in both the development and validation subsets, identify them more clearly. Now assuming the big plot corresponds to development and the smaller one to the validation set. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 1 |
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PONE-D-20-27484R1 Identifying bedrest using waist-worn triaxial accelerometers in preschool children PLOS ONE Dear Dr. Buchowski, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the remaining minor points raised during the review process. Please submit your revised manuscript by Feb 20 2021 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols We look forward to receiving your revised manuscript. Kind regards, Raffaele Ferri, MD Academic Editor PLOS ONE Additional Editor Comments (if provided): Please address the remaining concern by the reviewer. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: (No Response) ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: I Don't Know ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: I would like to thank the authors on addressing the reviewer´s comments in the first round of review. I just have one additional comment regarding the last version of the manuscript: Regarding Table 4, and excluding the new additions regarding Visual identification, I have noticed that numbers regarding remaining categories have changed with respect to the previous version of the manuscript, and also with the parts of Table 4 included in the response to the reviewers. Please review it carefully, and if applies, explain the reasons behind these changes and modify the corresponding parts in the manuscript text accordingly. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. |
| Revision 2 |
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Identifying bedrest using waist-worn triaxial accelerometers in preschool children PONE-D-20-27484R2 Dear Dr. Buchowski, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Raffaele Ferri, MD Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-20-27484R2 Identifying bedrest using waist-worn triaxial accelerometers in preschool children Dear Dr. Buchowski: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Raffaele Ferri Academic Editor PLOS ONE |
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