Peer Review History
Original SubmissionJune 20, 2019 |
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PONE-D-19-17546 In vivo clearance of nanoparticles by transcytosis across alveolar epithelial cells PLOS ONE Dear Dr. Ganguly, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. We would appreciate receiving your revised manuscript by Aug 31 2019 11:59PM. When you are ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. To enhance the reproducibility of your results, we recommend that if applicable you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see: http://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols Please include the following items when submitting your revised manuscript:
Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. We look forward to receiving your revised manuscript. Kind regards, Salik Hussain, D.V.M, M.S., Ph.D., Academic Editor PLOS ONE Journal Requirements: 1. When submitting your revision, we need you to address these additional requirements. Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at http://www.journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and http://www.journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf 2.Thank you for stating the following in your Competing Interests section: "None" Please complete your Competing Interests on the online submission form to state any Competing Interests. If you have no competing interests, please state "The authors have declared that no competing interests exist.", as detailed online in our guide for authors at http://journals.plos.org/plosone/s/submit-now This information should be included in your cover letter; we will change the online submission form on your behalf. Please know it is PLOS ONE policy for corresponding authors to declare, on behalf of all authors, all potential competing interests for the purposes of transparency. PLOS defines a competing interest as anything that interferes with, or could reasonably be perceived as interfering with, the full and objective presentation, peer review, editorial decision-making, or publication of research or non-research articles submitted to one of the journals. Competing interests can be financial or non-financial, professional, or personal. Competing interests can arise in relationship to an organization or another person. Please follow this link to our website for more details on competing interests: http://journals.plos.org/plosone/s/competing-interests [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: No Reviewer #2: Yes Reviewer #3: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: Ganguly et al. investigated the transcytosis of silica nanoparticles across alveolar epithelial cells. To perform these experiments they used a novel combination of techniques including intravital microscopy, TEM, whole organ imaging, and in vitro studies. The modification to inverted lung microscopy to include partial liquid ventilation to image the nanoparticles is interesting from a technical/experimental point of view. Also the use of relatively inert silica nanoparticles that have their kinetic profiles already established was a strength of the study and removed some factors such as inflammation, edema, and other toxicity that may have occurred with use of another particle type. The use of TiO2 nanoparticles was able to validate their findings from silica exposures. Comments 1. The materials sections states that 4 silica nanoparticle sizes were purchased. It is unclear in specific experiments which nanoparticle was utilized. For example, in the in vitro assessment of A549 cell internalization it only states the concentration not the size. Although mentioned within the materials the 30 and 500 nm nanoparticles do not appear to have been used. 2. The characterization of the nanoparticles is sufficient and well done. 3. The results as written include a large amount of discussion. These portions need to be moved to the discussion. As currently written the discussion is lacking in depth. 4. Figures 2C, 3G, and 4E include graphs with error bars. These figures lack statistical analysis. Please perform statistical assessments of these data to establish if differences are significant. Also add a section into the methods detailing statistical information such as group sizes, statistical tests, and threshold of significance. Reviewer #2: The manuscript “In vivo clearance of nanoparticles by transcytosis across alveolar epithelial cells” by Ganguly, et al, is well-written and describes research I believe would be of interest to the readership of PLOS One. The mechanisms by which nanoscale particles move from the alveolar space to systemic circulation is not fully understood and this manuscript provides impactful insight into this topic. I have some minor revisions I would recommend before publication in PLOS One: 1) While the hydrodynamic diameter of the nanoparticle agglomerates formed in this study was measured for PBS and culture medium, this agglomeration size is missing for the perfluorocarbon vehicle used in the partial liquid ventilation. Given the importance of this portion of the manuscript to the conclusions being drawn, it is critical that some measure of agglomeration in PFC is made. It is not described in the methods section what device was used to measure these diameters, but the Malvern Zetasizer can also be used for organic solvents. 2) The manuscript does not make a convincing case that significant amounts of nanomaterial are not being caught/cleared by the mucociliary escalator, especially since this method of clearance is widely established for micro-scale/fine particles. The assertion that “the particles do not leave the area via the airways” relies on the 60um z-stack in figure 2, suggesting that there are more particles in the alveolar sacs than in the ducts. However, large percentages of particle agglomerates should be getting caught in the conducting airways before they reach the alveolar ducts (as this is their purpose), and this effect would be even more pronounced in human lungs where there is more branching. The manuscript should include some discussion on the relative proportions of inhaled nanoparticle agglomerates which reach the alveolar space vs that which is cleared by the conducting airways. 3) Related to the previous point, the clearance of particles by mucociliary action would put them into the gastrointestinal tract, providing a new potential point of entry into systemic circulation. While it is unlikely that the GI tracts of the study mice are still available for analysis, some discussion into why the authors believe that alveolar uptake is a more important contributor to systemic nanoparticle circulation than GI uptake would be warranted. 4) Nanosilica is known to be cytotoxic and causes redox stress in most other in vitro research. It is recommended that, at the least, some measure of cytotoxicity at study doses be provided in the supplementary information. Some discussion on the justification for using the doses applied in this study (as in, comparisons to “real world” exposures) as well as why no cytotoxicity or inflammation was observed (what doses would cause these effects and are they realistic exposures?) would be helpful to establish the relevance of the manuscript. 5) More speculatively, it is surprising to me that a “fast track” mechanism for transporting inhaled particles in bulk to the bloodstream/lymph would even exist, given how many other safeguards are in place to prevent exactly that. I am curious to hear the author’s opinions on why such a mechanism might exist and what purpose this would serve the animal. Reviewer #3: The authors studied the mechanism of silica nanoparticles (50 nm) to get cleared by crossing the lung epithelium within 30 minutes. The authors presented fluorescence data and TEM showing the particles in transcytosis. This is an interesting observation, however, more proof is needed on this clearance pathway. 1. Amorphous Silica has been shown to be soluble in the presence of salts and proteins, the authors should test the dissolution rate of the these nanoparticles in physiologically relevant lung fluid. This is important because fluorescent labels may be released to cause an artifact of particle clearance. 2. More quantitative method of clearance is the ICP-MS, especially for the silica with silver cores, which could give more accurate data than fluorescence. 3. Transcytosis is often mentioned, but rarely a detailed pathway is described. This study lacks a mechanistic understanding other than an interesting phenomenon. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files to be viewed.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please note that Supporting Information files do not need this step. |
Revision 1 |
In vivo clearance of nanoparticles by transcytosis across alveolar epithelial cells PONE-D-19-17546R1 Dear Dr. Ganguly, We are pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it complies with all outstanding technical requirements. Within one week, you will receive an e-mail containing information on the amendments required prior to publication. When all required modifications have been addressed, you will receive a formal acceptance letter and your manuscript will proceed to our production department and be scheduled for publication. Shortly after the formal acceptance letter is sent, an invoice for payment will follow. To ensure an efficient production and billing process, please log into Editorial Manager at https://www.editorialmanager.com/pone/, click the "Update My Information" link at the top of the page, and update your user information. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, you must inform our press team as soon as possible and no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. With kind regards, Salik Hussain, D.V.M, M.S., Ph.D., Academic Editor PLOS ONE Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation. Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed Reviewer #3: All comments have been addressed ********** 2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 3. Has the statistical analysis been performed appropriately and rigorously? Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** 6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The authors have adequately addressed reviewer feedback. Following revisions the manuscript is technically and statistically sound. This meets the criteria for publication in PLoS One. Reviewer #2: The authors have addressed the minor revisions I requested, and I recommend publication of this work in PLOS ONE. Reviewer #3: The authors sufficiently addressed the comments from reviewers, so now I would recommend its acceptance. ********** 7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Reviewer #3: Yes: tian xia |
Formally Accepted |
PONE-D-19-17546R1 In vivo clearance of nanoparticles by transcytosis across alveolar epithelial cells Dear Dr. Ganguly: I am pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please notify them about your upcoming paper at this point, to enable them to help maximize its impact. If they will be preparing press materials for this manuscript, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. For any other questions or concerns, please email plosone@plos.org. Thank you for submitting your work to PLOS ONE. With kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Salik Hussain Academic Editor PLOS ONE |
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