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Open Access

Peer-reviewed

Research Article

RNA secondary structure prediction with pseudoknots: Contribution of algorithm versus energy model

Hosna Jabbari ,

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

* E-mail: jabbari@ualberta.ca

Affiliation Department of Computer Science, University of Vermont, Burlington, Vermont, United States of America

http://orcid.org/0000-0002-7155-2297

⨯
Ian Wark,

Roles Software, Validation, Visualization

Affiliation Ingenuity Lab, Department of Chemical and Materials Engineering, University of Alberta, Edmonton, Alberta, Canada
⨯
Carlo Montemagno

Roles Funding acquisition, Supervision

Affiliation Southern Illinois University Carbondale, Carbondale, Illinois, United States of America
⨯

RNA secondary structure prediction with pseudoknots: Contribution of algorithm versus energy model

Hosna Jabbari,
Ian Wark,
Carlo Montemagno

x

Published: April 5, 2018
https://doi.org/10.1371/journal.pone.0194583

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RNA structure
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RNA folding
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Free energy
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RNA structure prediction
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Algorithms
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Molecular structure
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Pseudoknots
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RNA stem-loop structure
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