Improved Annotation of 3′ Untranslated Regions and Complex Loci by Combination of Strand-Specific Direct RNA Sequencing, RNA-Seq and ESTs

Nicholas J. Schurch; Christian Cole; Alexander Sherstnev; Junfang Song; Céline Duc; Kate G. Storey; W. H. Irwin McLean; Sara J. Brown; Gordon G. Simpson; Geoffrey J. Barton

doi:10.1371/journal.pone.0094270

Loading metrics

Open Access

Peer-reviewed

Research Article

Improved Annotation of 3′ Untranslated Regions and Complex Loci by Combination of Strand-Specific Direct RNA Sequencing, RNA-Seq and ESTs

Nicholas J. Schurch ,

Contributed equally to this work with: Nicholas J. Schurch, Christian Cole, Alexander Sherstnev

Affiliations Division of Computational Biology, University of Dundee, Dundee, United Kingdom, Division of Biological Chemistry and Drug Discovery, University of Dundee, Dundee, United Kingdom, Centre for Gene Regulation and Expression, University of Dundee, Dundee, United Kingdom
⨯
Christian Cole ,

Contributed equally to this work with: Nicholas J. Schurch, Christian Cole, Alexander Sherstnev

Affiliations Division of Computational Biology, University of Dundee, Dundee, United Kingdom, Division of Biological Chemistry and Drug Discovery, University of Dundee, Dundee, United Kingdom, Centre for Gene Regulation and Expression, University of Dundee, Dundee, United Kingdom
⨯
Alexander Sherstnev ,

Contributed equally to this work with: Nicholas J. Schurch, Christian Cole, Alexander Sherstnev

Affiliation Division of Computational Biology, University of Dundee, Dundee, United Kingdom
⨯
Junfang Song,

Affiliation Division of Cell and Developmental Biology, University of Dundee, Dundee, United Kingdom
⨯
Céline Duc,

Affiliation Division of Plant Sciences, University of Dundee, Dundee, United Kingdom
⨯
Kate G. Storey,

Affiliation Division of Cell and Developmental Biology, University of Dundee, Dundee, United Kingdom
⨯
W. H. Irwin McLean,

Affiliation Centre for Dermatology and Genetic Medicine, University of Dundee, Dundee, United Kingdom
⨯
Sara J. Brown,

Affiliation Centre for Dermatology and Genetic Medicine, University of Dundee, Dundee, United Kingdom
⨯
Gordon G. Simpson,

Affiliations Division of Plant Sciences, University of Dundee, Dundee, United Kingdom, Cell and Molecular Sciences, The James Hutton Institute, Dundee, United Kingdom
⨯
Geoffrey J. Barton

* E-mail: g.j.barton@dundee.ac.uk

Affiliations Division of Computational Biology, University of Dundee, Dundee, United Kingdom, Division of Biological Chemistry and Drug Discovery, University of Dundee, Dundee, United Kingdom, Centre for Gene Regulation and Expression, University of Dundee, Dundee, United Kingdom
⨯

Improved Annotation of 3′ Untranslated Regions and Complex Loci by Combination of Strand-Specific Direct RNA Sequencing, RNA-Seq and ESTs

Nicholas J. Schurch,
Christian Cole,
Alexander Sherstnev,
Junfang Song,
Céline Duc,
Kate G. Storey,
W. H. Irwin McLean,
Sara J. Brown,
Gordon G. Simpson,
Geoffrey J. Barton

Published: April 10, 2014
https://doi.org/10.1371/journal.pone.0094270

Reader Comments (0)

Post a new comment on this article

Subject Areas
?

For more information about PLOS Subject Areas, click here.
We want your feedback. Do these Subject Areas make sense for this article? Click the target next to the incorrect Subject Area and let us know. Thanks for your help!

Genome annotation
Is the Subject Area "Genome annotation" applicable to this article?

Thanks for your feedback.
Untranslated regions
Is the Subject Area "Untranslated regions" applicable to this article?

Thanks for your feedback.
RNA sequencing
Is the Subject Area "RNA sequencing" applicable to this article?

Thanks for your feedback.
Expressed sequence tags
Is the Subject Area "Expressed sequence tags" applicable to this article?

Thanks for your feedback.
Genomics
Is the Subject Area "Genomics" applicable to this article?

Thanks for your feedback.
Small nucleolar RNA
Is the Subject Area "Small nucleolar RNA" applicable to this article?

Thanks for your feedback.
Arabidopsis thaliana
Is the Subject Area "Arabidopsis thaliana" applicable to this article?

Thanks for your feedback.
Human genomics
Is the Subject Area "Human genomics" applicable to this article?

Thanks for your feedback.