Named Entity Recognition for Bacterial Type IV Secretion Systems

Sophia Ananiadou; Dan Sullivan; William Black; Gina-Anne Levow; Joseph J. Gillespie; Chunhong Mao; Sampo Pyysalo; BalaKrishna Kolluru; Junichi Tsujii; Bruno Sobral

doi:10.1371/journal.pone.0014780

Loading metrics

Open Access

Peer-reviewed

Research Article

Named Entity Recognition for Bacterial Type IV Secretion Systems

Sophia Ananiadou ,

Contributed equally to this work with: Sophia Ananiadou, Dan Sullivan

Affiliations School of Computer Science, University of Manchester, Manchester, United Kingdom, National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, United Kingdom
⨯
Dan Sullivan ,

Contributed equally to this work with: Sophia Ananiadou, Dan Sullivan

* E-mail: dsulliva@vbi.vt.edu

Affiliation Virginia Bioinformatics Institute at Virginia Tech, Blacksburg, Virginia, United States of America
⨯
William Black,

Affiliation National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, United Kingdom
⨯
Gina-Anne Levow,

Affiliation School of Computer Science, University of Manchester, Manchester, United Kingdom
⨯
Joseph J. Gillespie,

Affiliation Virginia Bioinformatics Institute at Virginia Tech, Blacksburg, Virginia, United States of America
⨯
Chunhong Mao,

Affiliation Virginia Bioinformatics Institute at Virginia Tech, Blacksburg, Virginia, United States of America
⨯
Sampo Pyysalo,

Affiliation Department of Computer Science, School of Information Science and Technology, University of Tokyo, Tokyo, Japan
⨯
BalaKrishna Kolluru,

Affiliations School of Computer Science, University of Manchester, Manchester, United Kingdom, National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, United Kingdom
⨯
Junichi Tsujii,

Affiliations School of Computer Science, University of Manchester, Manchester, United Kingdom, National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, United Kingdom, Department of Computer Science, School of Information Science and Technology, University of Tokyo, Tokyo, Japan
⨯
Bruno Sobral

Affiliation Virginia Bioinformatics Institute at Virginia Tech, Blacksburg, Virginia, United States of America
⨯

Named Entity Recognition for Bacterial Type IV Secretion Systems

Sophia Ananiadou,
Dan Sullivan,
William Black,
Gina-Anne Levow,
Joseph J. Gillespie,
Chunhong Mao,
Sampo Pyysalo,
BalaKrishna Kolluru,
Junichi Tsujii,
Bruno Sobral

Published: March 29, 2011
https://doi.org/10.1371/journal.pone.0014780

Reader Comments (0)

Post a new comment on this article

Subject Areas
?

For more information about PLOS Subject Areas, click here.
We want your feedback. Do these Subject Areas make sense for this article? Click the target next to the incorrect Subject Area and let us know. Thanks for your help!

Secretion systems
Is the Subject Area "Secretion systems" applicable to this article?

Thanks for your feedback.
Machine learning
Is the Subject Area "Machine learning" applicable to this article?

Thanks for your feedback.
Named entity recognition
Is the Subject Area "Named entity recognition" applicable to this article?

Thanks for your feedback.
Ontologies
Is the Subject Area "Ontologies" applicable to this article?

Thanks for your feedback.
Gene ontologies
Is the Subject Area "Gene ontologies" applicable to this article?

Thanks for your feedback.
Syntax
Is the Subject Area "Syntax" applicable to this article?

Thanks for your feedback.
Semantics
Is the Subject Area "Semantics" applicable to this article?

Thanks for your feedback.
Text mining
Is the Subject Area "Text mining" applicable to this article?

Thanks for your feedback.