About the Authors
- Elisabeth M. Bik
-
Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing
¶‡ These authors are co-first authors on this work.
Affiliation uBiome, San Francisco, CA, United States of America
- Sara W. Bird
-
Roles Conceptualization, Data curation, Formal analysis, Supervision, Validation, Writing – original draft, Writing – review & editing
¶‡ These authors are co-first authors on this work.
Affiliation uBiome, San Francisco, CA, United States of America
- Juan P. Bustamante
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Roles Data curation, Formal analysis, Methodology, Software
Affiliation uBiome, San Francisco, CA, United States of America
- Luis E. Leon
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Roles Data curation, Formal analysis, Methodology, Software
Affiliation uBiome, San Francisco, CA, United States of America
- Pamela A. Nieto
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Roles Data curation, Formal analysis, Methodology, Validation, Visualization, Writing – original draft
Affiliation uBiome, San Francisco, CA, United States of America
- Kwasi Addae
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Roles Methodology, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Víctor Alegría-Mera
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Roles Data curation, Methodology, Software
Affiliation uBiome, San Francisco, CA, United States of America
- Cristian Bravo
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Roles Methodology, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Denisse Bravo
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Roles Methodology, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Juan P. Cardenas
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Roles Data curation, Methodology, Writing – original draft
Affiliation uBiome, San Francisco, CA, United States of America
- Glenn A. Carson
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Roles Formal analysis, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Adam Caughey
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Roles Methodology, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Paulo C. Covarrubias
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Roles Methodology, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- José Pérez-Donoso
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Roles Methodology, Supervision
Affiliation uBiome, San Francisco, CA, United States of America
- Graham Gass
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Roles Methodology, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Sarah L. Gupta
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Roles Investigation, Validation, Writing – original draft
Affiliation uBiome, San Francisco, CA, United States of America
- Kira Harman
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Roles Methodology, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Donna Marie B. Hongo
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Roles Data curation, Formal analysis, Supervision, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Juan C. Jiménez
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Roles Methodology, Supervision, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Laurens Kraal
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Roles Conceptualization, Data curation, Project administration
Affiliation uBiome, San Francisco, CA, United States of America
- Felipe Melis-Arcos
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Roles Conceptualization, Data curation, Software
Affiliation uBiome, San Francisco, CA, United States of America
- Eduardo H. Morales
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Roles Methodology, Supervision, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Amanda Morton
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Roles Methodology, Supervision, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Camila F. Navas
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Roles Data curation, Methodology, Software
Affiliation uBiome, San Francisco, CA, United States of America
- Harold Nuñez
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Roles Data curation, Methodology, Software
Affiliation uBiome, San Francisco, CA, United States of America
- Eduardo Olivares
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Roles Methodology, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Nicolás Órdenes-Aenishanslins
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Roles Methodology, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Francisco J. Ossandon
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Roles Data curation, Formal analysis, Methodology, Software, Visualization
Affiliation uBiome, San Francisco, CA, United States of America
- Richard Phan
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Roles Methodology, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Raul Pino
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Roles Data curation, Methodology, Software
Affiliation uBiome, San Francisco, CA, United States of America
- Katia Soto-Liebe
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Roles Project administration, Supervision
Affiliation uBiome, San Francisco, CA, United States of America
- Ignacio Varas
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Roles Data curation, Methodology, Software
Affiliation uBiome, San Francisco, CA, United States of America
- Patricia Vera-Wolf
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Roles Data curation, Software, Visualization
Affiliation uBiome, San Francisco, CA, United States of America
- Nathaniel A. Walton
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Roles Conceptualization, Funding acquisition, Supervision
Affiliation uBiome, San Francisco, CA, United States of America
- Daniel E. Almonacid
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Roles Conceptualization, Data curation, Supervision, Writing – original draft, Writing – review & editing
Affiliation uBiome, San Francisco, CA, United States of America
- Audrey D. Goddard
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Roles Conceptualization, Data curation, Formal analysis, Supervision, Validation, Writing – review & editing
Affiliation uBiome, San Francisco, CA, United States of America
- Juan A. Ugalde
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Roles Conceptualization, Data curation, Formal analysis, Methodology, Validation, Visualization, Writing – review & editing
Affiliation uBiome, San Francisco, CA, United States of America
- Susan Zneimer
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Roles Data curation, Formal analysis, Methodology, Supervision, Validation
Affiliation uBiome, San Francisco, CA, United States of America
- Jessica Richman
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Roles Conceptualization, Funding acquisition, Resources, Writing – review & editing
Affiliation uBiome, San Francisco, CA, United States of America
- Zachary S. Apte
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Roles Conceptualization, Funding acquisition, Resources, Writing – review & editing
* E-mail: zac@ubiome.com
Affiliations uBiome, San Francisco, CA, United States of America, Department of Biochemistry and Biophysics, University of California San Francisco, San Francisco, CA, United States of America
Competing Interests
All of the authors of the paper are current or past employees of uBiome, Inc. and have received stock options as well as other compensation. Some authors have patents pending in relation to this work: US Application No 15/198,818, Method and system for diagnostic testing, Application No 16/084,945, Method and system for microbiome-derived diagnostics and therapeutics for bacterial vaginosis, and Application No 16/115,542, Method and system for characterization for female reproductive system-related conditions associated with microorganisms. The data in this article were used in the development of a commercially available test product developed and marketed by uBiome. This does not alter our adherence to PLOS ONE policies on sharing data and materials.