About the Authors

Caroline Charre

Roles Data curation, Formal analysis, Writing – original draft

Affiliations Laboratoire de Virologie, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, Lyon, France, Centre International de Recherche en Infectiologie (CIRI) (Inserm U1111, CNRS UMR 5308), Lyon, France, University of Lyon, Université Claude Bernard Lyon 1, Villeurbanne, France

Laurent Cotte

Roles Conceptualization, Resources, Writing – review & editing

Affiliations Service des Maladies Infectieuses, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, Lyon, France, INSERM U1052, Cancer Research Center of Lyon (CRCL), UMR_S1052, Lyon, France

Rolf Kramer

Roles Data curation, Writing – review & editing

Affiliations Laboratoire de Virologie, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, Lyon, France, European Public Health Microbiology Training Programme (EUPHEM), European Centre for Disease Prevention and Control, Stockholm, Sweden

Patrick Miailhes

Roles Resources

Affiliation Service des Maladies Infectieuses, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, Lyon, France

Matthieu Godinot

Roles Resources

Affiliation Service des Maladies Infectieuses, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, Lyon, France

Joseph Koffi

Roles Resources

Affiliations Service des Maladies Infectieuses, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, Lyon, France, Centre for Clinical Research, Department of Hepatology, Groupement Hospitalier Nord, Hospices Civils de Lyon, Lyon, France

Caroline Scholtès

Roles Formal analysis, Writing – review & editing

Affiliations Laboratoire de Virologie, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, Lyon, France, University of Lyon, Université Claude Bernard Lyon 1, Villeurbanne, France, INSERM U1052, Cancer Research Center of Lyon (CRCL), UMR_S1052, Lyon, France

Christophe Ramière

Roles Conceptualization, Formal analysis, Validation, Writing – review & editing

christophe.ramiere@chu-lyon.fr

Affiliations Laboratoire de Virologie, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, Lyon, France, Centre International de Recherche en Infectiologie (CIRI) (Inserm U1111, CNRS UMR 5308), Lyon, France, University of Lyon, Université Claude Bernard Lyon 1, Villeurbanne, France

Competing Interests

The authors have read the journal's policy and the authors of this manuscript have the following competing interests: Caroline Charre has received travel expenses to conferences from Merck. Laurent Cotte has received research grants from Merck and ViiV Healthacare, travel expenses and registrations to conferences from Abbvie pharmaceuticals, Bristol-Myers Squibb, Gilead Sciences, Janssen, Merck and ViiV Healthcare and fees for interventions from Abbvie pharmaceuticals, Bristol-Myers Squibb, Gilead Sciences, Janssen, Merck and ViiV Healthcare. Joseph Koffi has received fees for interventions from Gilead Sciences. Christophe Ramière has received travel expenses and registrations to conferences from Roche Pharmaceuticals and Merck. None of this funding was in relation with the presented study. This does not alter our adherence to PLOS ONE policies on sharing data and materials.