Peer Review History
| Original SubmissionMay 5, 2025 |
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Dear Dr. Fairlamb, Please submit your revised manuscript within 30 days Aug 23 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosntds@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pntd/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript: Response to ReviewersRevised Manuscript with Track ChangesManuscript Shaden Kamhawi co-Editor-in-Chief PLOS Neglected Tropical Diseases orcid.org/0000-0003-4304-636XX Paul Brindley co-Editor-in-Chief PLOS Neglected Tropical Diseases orcid.org/0000-0003-1765-0002 Additional Editor Comments : Journal Requirements: 1) We ask that a manuscript source file is provided at Revision. Please upload your manuscript file as a .doc, .docx, .rtf or .tex. If you are providing a .tex file, please upload it under the item type u2018LaTeX Source Fileu2019 and leave your .pdf version as the item type u2018Manuscriptu2019. 2) Please upload all main figures as separate Figure files in .tif or .eps format. For more information about how to convert and format your figure files please see our guidelines: https://journals.plos.org/plosntds/s/figures 3) We note that your Data Availability Statement is currently as follows: "All relevant data are within the manuscript and its Supporting Information files". We noticed that there aren't any supporting information files uploaded in the online submission form. Please confirm at this time whether or not your submission contains all raw data required to replicate the results of your study. Authors must share the “minimal data set” for their submission. PLOS defines the minimal data set to consist of the data required to replicate all study findings reported in the article, as well as related metadata and methods (https://journals.plos.org/plosone/s/data-availability#loc-minimal-data-set-definition). For example, authors should submit the following data: 1) The values behind the means, standard deviations and other measures reported; 2) The values used to build graphs; 3) The points extracted from images for analysis.. Authors do not need to submit their entire data set if only a portion of the data was used in the reported study. If your submission does not contain these data, please either upload them as Supporting Information files or deposit them to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of recommended repositories, please see https://journals.plos.org/plosone/s/recommended-repositories. If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. If data are owned by a third party, please indicate how others may request data access. 4) Please provide a completed 'Competing Interests' statement, including any COIs declared by your co-authors. If you have no competing interests to declare, please state "The authors have declared that no competing interests exist". Otherwise please declare all competing interests beginning with the statement "I have read the journal's policy and the authors of this manuscript have the following competing interests:" Reviewers' comments: Key Review Criteria Required for Acceptance? As you describe the new analyses required for acceptance, please consider the following: Methods -Are the objectives of the study clearly articulated with a clear testable hypothesis stated? -Is the study design appropriate to address the stated objectives? -Is the population clearly described and appropriate for the hypothesis being tested? -Is the sample size sufficient to ensure adequate power to address the hypothesis being tested? -Were correct statistical analysis used to support conclusions? -Are there concerns about ethical or regulatory requirements being met? Reviewer #1: No issues Reviewer #2: Figure 5: I have some concerns about using resazurin as an indicator of proliferation. Changes in cellular metabolic states may increase or decrease fluorescence in the assay, which does not necessarily correlate with cell proliferation. I suggest interpreting these data as cell viability rather than proliferation. Reviewer #3: Yes, this is a well-conducted study to explore the requirements of pterin analogous for the growth of Crithidia fasciculata, Trypanosoma brucei and Leishmania major. The methods are appropriately described and support the conclusions. ********** Results -Does the analysis presented match the analysis plan? -Are the results clearly and completely presented? -Are the figures (Tables, Images) of sufficient quality for clarity? Reviewer #1: No issues Reviewer #2: Yes Reviewer #3: Yes, the results are clearly stated and followed the proposal to investigate the variability of pterin derivatives in supporting the growth of the three different species. ********** Conclusions -Are the conclusions supported by the data presented? -Are the limitations of analysis clearly described? -Do the authors discuss how these data can be helpful to advance our understanding of the topic under study? -Is public health relevance addressed? Reviewer #1: see comments below Reviewer #2: Yes Reviewer #3: Yes, the conclusions confirms previous findings for the requirement of pterins in Crithida and Leishmania and extend it to T. brucei. It also demonstrated that preferential accumulation of transformed in hydroxylated forms (H4B) in T. brucei. Based on previous studies, the possible role of this compounds remained unknown. ********** Editorial and Data Presentation Modifications? Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”. Reviewer #1: None Reviewer #2: I believe the paper could be enriched by adding a schematic figure illustrating the metabolic pathways of pterin utilization in these parasites. This could broaden the work’s reach to other audiences. Reviewer #3: The presentation is clear and I couldn't find possible required changes. A topic title could introduced before the ...In conclusion, (linde 388 ********** Summary and General Comments Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed. Reviewer #1: Ong et al. from the Fairlamb lab have studied pterin requirements for the growth of 3 different trypanosomatids. Pterins are known to be essential for the growth of these parasites although their exact function is still a mystery and differs from their role in other organisms. By using defined medium, they tested the growth of three parasite genus while complementing with a variety of pterin molecules. They have also studied the fate of the supplemented pterins by using HPLC. The fact that pterins are required for growth of these parasite is not new but by including a leishmania representative, T. brucei and Crithidia they were able to show some differences notably with Leishmania in comparison to the other genus (preference for reduced pterins and lack of a folate sparing effect). They also show that the absence of reduced pterins in stationary phase is most likely due to the exhaustion of the pterins in the culture medium. Overall this work was performed carefully and competently and few labs, if any, would have been able to make connections with the work of Kidder and Dewey, or Trager in the 50s-60s. I have a number relatively minor comments related to this work. 1. Since reduced pterins (BH4) is dominant intracellularly for all three parasites, I am wondering why T. brucei and Crithidia, in contrast to Leishmania, prefer oxidized pterins for growth. Does it have to do with their capacity to transport different form of pterins? Leishmania has has a large family of Folate-biopterin transporters (FBT) and maybe some of them specializes in the transport of BH2 and BH4. Does T. brucei and Crithidia have an extended FBT gene family? 2. This study has not really added to our vexing lack of understanding of pterin’s function in trypanosomatids (except their growth stimulating properties). The authors hypothesized that they may have a role to play in the synthesis of unsaturated fatty acids and sterols and they provide literature of the 60s to support this hypothesis. At lines 416-418, if I understand well, the authors make a statement that they may have evidence for this. Can the authors expand on this? 3. In table 2 what are the dash (-) indicating? Not done, no inhibition? 4. Title page: Why a hashtag sign for Ong? Reviewer #2: Minor revision Lines 213–216: I did not understand the purpose of comparing PTR1 activity with trypanothione reductase activity. What insight does this provide? Figure 4A: The resolution is poor. Please replace it with higher-resolution images. Figure 5: I have some concerns about using resazurin as an indicator of proliferation. Changes in cellular metabolic states may increase or decrease fluorescence in the assay, which does not necessarily correlate with cell proliferation. I suggest interpreting these data as cell viability rather than proliferation. Lines 404–405: I would be cautious about generalizing for all trypanosomatids based on limited examples. Including T. cruzi in the discussion might allow such generalizations for pathogenic trypanosomatids. I believe the paper could be enriched by adding a schematic figure illustrating the metabolic pathways of pterin utilization in these parasites. This could broaden the work’s reach to other audiences. Reviewer #3: In this manuscript the authors re-explore in a comparative manner the requirements of pterin derivatives in the growth of three species of kinetoplastids. The study serves a premisse to further understand the role of these cofactors, essential in these organismos. However, the study advance quite little in the understanding of their functions. ********** PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy . Reviewer #1: No Reviewer #2: No Reviewer #3: No Figure resubmission:Reproducibility:--> -->-->To enhance the reproducibility of your results, we recommend that authors of applicable studies deposit laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. Additionally, PLOS ONE offers an option to publish peer-reviewed clinical study protocols. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols-->?> |
| Revision 1 |
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Dear Professor Fairlamb, We are pleased to inform you that your manuscript 'Comparative metabolism of conjugated and unconjugated pterins in Crithidia, Leishmania and African trypanosomes' has been provisionally accepted for publication in PLOS Neglected Tropical Diseases. Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests. Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated. IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript. Should you, your institution's press office or the journal office choose to press release your paper, you will automatically be opted out of early publication. We ask that you notify us now if you or your institution is planning to press release the article. All press must be co-ordinated with PLOS. Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases. Best regards, Martin Craig Taylor Guest Editor PLOS Neglected Tropical Diseases Hira Nakhasi Section Editor PLOS Neglected Tropical Diseases Shaden Kamhawi co-Editor-in-Chief PLOS Neglected Tropical Diseases orcid.org/0000-0003-4304-636XX Paul Brindley co-Editor-in-Chief PLOS Neglected Tropical Diseases orcid.org/0000-0003-1765-0002 *********************************************************** This revision deals with all the reviewer's comments appropriately and is now acceptable for publication. p.p1 {margin: 0.0px 0.0px 0.0px 0.0px; line-height: 16.0px; font: 14.0px Arial; color: #323333; -webkit-text-stroke: #323333}span.s1 {font-kerning: none |
| Formally Accepted |
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Dear Professor Fairlamb, We are delighted to inform you that your manuscript, "Comparative metabolism of conjugated and unconjugated pterins in Crithidia, Leishmania and African trypanosomes," has been formally accepted for publication in PLOS Neglected Tropical Diseases. We have now passed your article onto the PLOS Production Department who will complete the rest of the publication process. All authors will receive a confirmation email upon publication. The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any scientific or type-setting errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript. Note: Proofs for Front Matter articles (Editorial, Viewpoint, Symposium, Review, etc...) are generated on a different schedule and may not be made available as quickly. Soon after your final files are uploaded, the early version of your manuscript will be published online unless you opted out of this process. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases. Best regards, Shaden Kamhawi co-Editor-in-Chief PLOS Neglected Tropical Diseases Paul Brindley co-Editor-in-Chief PLOS Neglected Tropical Diseases |
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