Peer Review History
| Original SubmissionMarch 1, 2022 |
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Dear Pr NEVIERE, Thank you very much for submitting your manuscript "Bothrops lanceolatus snake venom impairs mitochondrial respiration and induces DNA release in human heart preparation" for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. In light of the reviews (below this email), we would like to invite the resubmission of a significantly-revised version that takes into account the reviewers' comments.
We cannot make any decision about publication until we have seen the revised manuscript and your response to the reviewers' comments. Your revised manuscript is also likely to be sent to reviewers for further evaluation. When you are ready to resubmit, please upload the following: [1] A letter containing a detailed list of your responses to the review comments and a description of the changes you have made in the manuscript. Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. [2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file). Important additional instructions are given below your reviewer comments. Please prepare and submit your revised manuscript within 60 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email. Please note that revised manuscripts received after the 60-day due date may require evaluation and peer review similar to newly submitted manuscripts. Thank you again for your submission. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments. Sincerely, Kartik Sunagar, Ph.D. Deputy Editor PLOS Neglected Tropical Diseases Kartik Sunagar Deputy Editor PLOS Neglected Tropical Diseases *********************** Reviewer's Responses to Questions Key Review Criteria Required for Acceptance? As you describe the new analyses required for acceptance, please consider the following: Methods -Are the objectives of the study clearly articulated with a clear testable hypothesis stated? -Is the study design appropriate to address the stated objectives? -Is the population clearly described and appropriate for the hypothesis being tested? -Is the sample size sufficient to ensure adequate power to address the hypothesis being tested? -Were correct statistical analysis used to support conclusions? -Are there concerns about ethical or regulatory requirements being met? Reviewer #1: The objectives of this study are clear and well presented. The study design is appropriate and the population is clearly described, as well as the methods used. Appropriate statistical analyses were carried out. I have no ethical concerns with the study. Line 101: The term ‘purified venom’ is a bit misleading since the term ‘purified’ usually refers to the use of isolated toxins. In this case the authors are using crude or whole venom. I suggest using the term ‘whole B. lanceolatus venom' throughout the paper instead of ‘purified venom’. Line 103: The authors only used one incubation time (24 hr). It would have been appropriate to use shorter incubation times as well, for example 3 hr or 6 hr, to have a view on the early effects of venom in the system. That would provide a time-course of the effects being studied. Reviewer #2: Please refer general comments -------------------- Results -Does the analysis presented match the analysis plan? -Are the results clearly and completely presented? -Are the figures (Tables, Images) of sufficient quality for clarity? Reviewer #1: The analysis presented matched the analysis plan and are clearly formulated. Results are clear and well presented. The figures and tables are also clear and summarize the main findings of the study. Line 174: The text is confusing with the use of the word ‘either’. Please revise. Reviewer #2: Please refer general comments -------------------- Conclusions -Are the conclusions supported by the data presented? -Are the limitations of analysis clearly described? -Do the authors discuss how these data can be helpful to advance our understanding of the topic under study? -Is public health relevance addressed? Reviewer #1: Most of the conclusions are supported by the data, with one exception: Line 226: The extrapolation of these observations to the clinical situation should be made with caution. In the experimental setting used. Cardiac tissue is directly exposed to venom for a prolonged period of time (24 hr). This is very different from a real envenoming case since (a) previous toxicokinetic data indicate that venom concentration in cardiac tissue after experimental envenoming in vivo is very low, and (b) the vasculature of the heart is of the ‘continuous’ type, meaning that it has low permeability and, therefore, the amount of venom that would reach myocardial cells is probably low in vivo. Thus, even though the observations clearly demonstrate that this venom is able to affect cardiac tissue and release DAMPs, the extrapolation of these findings to explain cardiac effects in snakebites is too speculative. This comment also applies to the conclusion paragraph (lines 248-250). The authors present a well structured discussion on how these findings help to explain one important aspect of the action of snake venoms in tissues, i.e., the release of DAMPs which might impact on the innate immune response, with a possible effect on the systemic outcome of envenomings. The authors did not discuss the limitations of their work, some of which are: (1) the incubation time is 24 hr and it is not clear whether shorter time intervals would induce similar alterations. (2) The work was done with crude venom, and this does not allow the identification of the toxins responsible for the effects. Line 212: It should be Bothrops atrox, B. brazili and Lachesis muta Line 213: It should be ‘French overseas territories’ Reviewer #2: Please refer general comments -------------------- Editorial and Data Presentation Modifications? Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”. Reviewer #1: (No Response) Reviewer #2: Please refer general comments -------------------- Summary and General Comments Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed. Reviewer #1: This study presents an interesting contribution that expands our understanding on the action of the venom of B. lanceolatus. In recent years, the concept that snake venoms induce tissue damage with the release od DAMPs, and that these molecules may play a role in the overall pathophysiology of envenoming, contributing to systemic inflammation, has gained support. This study demonstrates with a sound experimental setting that the venom of B. lanceolatus is able to impair mitocondrial respiratory funcion in human cardiac tissue and also to release DAMPs from the tissue. My main concern has to do with the extrapolation made by the authors on the possible implications of their findings for the clinical cardiotoxicity induced by this venom. In my comments to the Discussion I have mentioned why I believe this extrapolation is too speculative and not necessarily suported by their findings. The main conclusion of this study should be focused on the ability of venom to impair mitochondrial function and to release DAMPS from the tissue, without extrapolating this to explain cardiac dysfunction in envenomings. For this, the authors should use in vivo experimental systems. Reviewer #2: The study on Bothrops lanceolatus snake venom impairs mitochondrial respiration and induces DNA release in human heart preparation (PNTD-D-22-00263) by Cano-Sanchez et al have tried to address the effect of the venom on the cardiac muscle fibres, especially on the role of mitochondria in the venom induced toxicity. The authors have made an interesting observation of leaking of mitochondrial DNA which they consider it as the sole DAMP involved in venom induced cardiac related systemic toxicity. It is interesting that the authors have also tried to connect the mitochondrial DNA release to the innate immune response. The manuscript may be accepted after addressing the following queries. Minor comments: Line 65 – remove receptor from ‘Toll-Like Receptor (TLR) receptors’. Line 103 - what is the vehicle control used? Line 135- mention the concentration of antimycin-A. Line 192 - In table 2, third column doesn’t match the description of the legend. Line 195, 197,198 - There is no uniformity in manuscript writing, for example, VAA is written as VAA. Line 196 - Correct the word ‘Vsucc+glu’. Line 106 – methodology for, ‘High-resolution respirometry’ is clumsy and difficult to follow. Split the methodology and explain in detail. Major comments: What is the basis for Bothrops lanceolatus venom targeting cardiac muscle fibres only? The authors have to discuss about the fate of mitochondria after releasing their DNA. It is even better if they demonstrate the extent of their viability. Inclusion of the data on nuclear DNA release will make the readership better. As the study focuses on the mitochondrial dysfunction, it is essential to shed light on the possible role of mitochondrial membrane lipids, example lipid peroxidation, cardiolipin role etc if any. The authors have focussed only on the release of mitochondrial DNA, it is important that they should address how and what promote the DNA release. Is the venom/venom toxin(s) exerting the DNA release effect directly interacting with the mitochondria (after crossing the sarcolemma) or does it acts at the sarcolemma level? An insight in to the mechanism of action will provide better clarity. It is important for the authors to demonstrate the state of respiration of mitochondria in venom treated cardiac fibres without saponin treatment. Mitochondrial DNA release and its connectivity to innate immunity need to be discussed properly. -------------------- PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Figure Files: While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Data Requirements: Please note that, as a condition of publication, PLOS' data policy requires that you make available all data used to draw the conclusions outlined in your manuscript. Data must be deposited in an appropriate repository, included within the body of the manuscript, or uploaded as supporting information. This includes all numerical values that were used to generate graphs, histograms etc.. For an example see here: http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001908#s5. Reproducibility: To enhance the reproducibility of your results, we recommend that you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. Additionally, PLOS ONE offers an option to publish peer-reviewed clinical study protocols. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols |
| Revision 1 |
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Dear Pr NEVIERE, We are pleased to inform you that your manuscript 'Bothrops lanceolatus snake venom impairs mitochondrial respiration and induces DNA release in human heart preparation' has been provisionally accepted for publication in PLOS Neglected Tropical Diseases. Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests. Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated. IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript. Should you, your institution's press office or the journal office choose to press release your paper, you will automatically be opted out of early publication. We ask that you notify us now if you or your institution is planning to press release the article. All press must be co-ordinated with PLOS. Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases. Best regards, Kartik Sunagar, Ph.D. Deputy Editor PLOS Neglected Tropical Diseases Kartik Sunagar Deputy Editor PLOS Neglected Tropical Diseases *********************************************************** Reviewer's Responses to Questions Key Review Criteria Required for Acceptance? As you describe the new analyses required for acceptance, please consider the following: Methods -Are the objectives of the study clearly articulated with a clear testable hypothesis stated? -Is the study design appropriate to address the stated objectives? -Is the population clearly described and appropriate for the hypothesis being tested? -Is the sample size sufficient to ensure adequate power to address the hypothesis being tested? -Were correct statistical analysis used to support conclusions? -Are there concerns about ethical or regulatory requirements being met? Reviewer #1: See general comments Reviewer #2: Refer general comments ********** Results -Does the analysis presented match the analysis plan? -Are the results clearly and completely presented? -Are the figures (Tables, Images) of sufficient quality for clarity? Reviewer #1: See general comments Reviewer #2: Refer general comments ********** Conclusions -Are the conclusions supported by the data presented? -Are the limitations of analysis clearly described? -Do the authors discuss how these data can be helpful to advance our understanding of the topic under study? -Is public health relevance addressed? Reviewer #1: See general comments Reviewer #2: Refer general comments ********** Editorial and Data Presentation Modifications? Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”. Reviewer #1: (No Response) Reviewer #2: Refer general comments ********** Summary and General Comments Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed. Reviewer #1: The authhors have adequately aqddressed my concerns and suggestions to the first version of this manuscript. The modifications introduced are satisfactory. Reviewer #2: The authors have studied the effect of Bothrops lanceolatus venom on the mitochondrial dysfunction and DAMPs release in human heart preparations. The observed effects were demonstrated in permeabilized cardiac fibers. The main concern was that the authors have demonstrated the mitochondrial dysfunction and DAMPs release in permeabilized cardiac fibers. Therefore, they were asked to demonstrate the effects in non-permeabilized cardiac fibers. That is treating the cardiac fibers directly with the venom, and also the signaling pathway. These have not been addressed. In this study, the role of TLRs, inflammasome formation, and type-I interferon responses are all speculative. Therefore need justifications. The last, but one sentence in the abstract is too speculative. ‘Hence, mitochondrial DAMPs will engage a vicious circle, which deregulates inflammation via aberrant mitochondrial signaling, impaired mitophagy, and disruption of mitochondrial dynamics. In this study, no evidence has been provided to justify the following statement. Mitochondrial dysfunction and release of mitochondrial DNA (DAMP) are good observations. Therefore, this manuscript may be accepted as a short report. ********** PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No |
| Formally Accepted |
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Dear Pr NEVIERE, We are delighted to inform you that your manuscript, "Bothrops lanceolatus snake venom impairs mitochondrial respiration and induces DNA release in human heart preparation," has been formally accepted for publication in PLOS Neglected Tropical Diseases. We have now passed your article onto the PLOS Production Department who will complete the rest of the publication process. All authors will receive a confirmation email upon publication. The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any scientific or type-setting errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript. Note: Proofs for Front Matter articles (Editorial, Viewpoint, Symposium, Review, etc...) are generated on a different schedule and may not be made available as quickly. Soon after your final files are uploaded, the early version of your manuscript will be published online unless you opted out of this process. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers. Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases. Best regards, Shaden Kamhawi co-Editor-in-Chief PLOS Neglected Tropical Diseases Paul Brindley co-Editor-in-Chief PLOS Neglected Tropical Diseases |
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