Peer Review History
| Original SubmissionJanuary 6, 2022 |
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Dear Dr. Anurag Varshney, Thank you very much for submitting your manuscript "Anti-Sporotrichotic Effects of Withania somnifera (L.) Dunal Whole-plant Extracts due to Peripheral Integrity Destabilization of Sporothrix globosa Yeast Cells" for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. In light of the reviews (below this email), we would like to invite the resubmission of a significantly-revised version that takes into account the reviewers' comments. We cannot make any decision about publication until we have seen the revised manuscript and your response to the reviewers' comments. Your revised manuscript is also likely to be sent to reviewers for further evaluation. When you are ready to resubmit, please upload the following: [1] A letter containing a detailed list of your responses to the review comments and a description of the changes you have made in the manuscript. Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. [2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file). Important additional instructions are given below your reviewer comments. Please prepare and submit your revised manuscript within 60 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email. Please note that revised manuscripts received after the 60-day due date may require evaluation and peer review similar to newly submitted manuscripts. Thank you again for your submission. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments. Sincerely, Angel Gonzalez, Ph.D. Associate Editor PLOS Neglected Tropical Diseases Christine Petersen Deputy Editor PLOS Neglected Tropical Diseases *********************** Reviewer's Responses to Questions Key Review Criteria Required for Acceptance? As you describe the new analyses required for acceptance, please consider the following: Methods -Are the objectives of the study clearly articulated with a clear testable hypothesis stated? -Is the study design appropriate to address the stated objectives? -Is the population clearly described and appropriate for the hypothesis being tested? -Is the sample size sufficient to ensure adequate power to address the hypothesis being tested? -Were correct statistical analysis used to support conclusions? -Are there concerns about ethical or regulatory requirements being met? Reviewer #1: 1. The objectives of the study was clearly articulated with a clear testable hypothesis. 2. The study design was appropriate. 3. As in vitro study so no need of population definition. 4. Statistical analysis was supportive. Reviewer #2: Include studies on the antisporotrichosis effects of other plants. Review the study "Ramírez-Soto MC, Aguilar-Ancori EG, Tirado-Sánchez A, Bonifaz A. Ecological Determinants of Sporotrichosis Etiological Agents. J Fungi (Basel). 2018;4(3):95." The objectives of the study are clearly articulated with a clear testable hypothesis stated. The study design is appropriate to address the objectives. There was not statistical analysis. What statistical tests did you use for comparisons? Reviewer #3: (No Response) Reviewer #4: Questions in Methods sections: 1. Is fungal culture medium the same than BHI? or are you referring to a different medium? please specify and comment the composition of the medium. 2) The rational behind ergosterol and sorbitol assays is not clear. Please specify. 3) I think the terms MIC50 and MIC80 are wrongly used here. 4) what were the standards used for the HPLC analysis and how is that you choose them? This section is not clear. how you identified withaferin, withanoline etc? -------------------- Results -Does the analysis presented match the analysis plan? -Are the results clearly and completely presented? -Are the figures (Tables, Images) of sufficient quality for clarity? Reviewer #1: 1. Analysis presented was match with the analysis plan. 2. Results were clearly and completely presented. 3. Figures and graphs were sufficient and clearly defined. Reviewer #2: Results is clearly presented. They suggested making comparisons AmB vs. WSWE, and WSWE vs. Untreated, using a statistical test (Figure 2). Trials are adequate, but I suggest making statistical comparisons (Figure 3). Reviewer #3: (No Response) Reviewer #4: Results comply with these points -------------------- Conclusions -Are the conclusions supported by the data presented? -Are the limitations of analysis clearly described? -Do the authors discuss how these data can be helpful to advance our understanding of the topic under study? -Is public health relevance addressed? Reviewer #1: 1. Yes conclusions were supported by data. 2. The author did not mention the limitation of study analysis. 3. The discussion part was weak in supporting the study findings for translational medicine. 4. The study did not addressed the public health importance in major concern. Reviewer #2: The study should focus on the in vitro test. The first paragraph is out of context., I suggest reviewing. I suggest expanding the discussion. Include articles on the antisporotrichotic effects of other plants. Consider to describe that the antisporotrichotic effect of WSWE probably results from the combination of the phytochemical components or from one particular component as well. They should also discuss further testing to identify the main phytochemical component of WSWE with antisporotrichotic activity. Describe and discuss the main limitations of your study. Reviewer #3: (No Response) Reviewer #4: Authors didnt describe the limitation of their study. -------------------- Editorial and Data Presentation Modifications? Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”. Reviewer #1: (No Response) Reviewer #2: Major revision Reviewer #3: (No Response) Reviewer #4: I would suggest the authors that 1. In your introduction, tell less about sporotrichosis and more about the public health problem and above all more about the how is currently used? what type of previous studies have been done to study it? what is its range of activity? what previous studies have been published. 2.Discussion is repetitive compared to the introduction. 3. The authors didn't explain about how the data analysis was done? how many times these experiments were carried out? 4. Authors used only one strain, hence they should been using the terms MIC50, MIC90. 5. I think assays of minimal fungicidal concentration would enrich this WSWE manuscript. As well as TEM 6. Testing more strains would be useful -------------------- Summary and General Comments Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed. Reviewer #1: 1.The title was long and confusing, should be revised. 2. Limitation of the study should be discussed. 3. The result should be clearly correlate with future role in disease management(Translational medicine) Reviewer #2: (No Response) Reviewer #3: In this study Balkrishna et al., describes the antifungal activity of Withania somnifera whole plant extract against Sporothrix globose and its plausible use in treating Sporotricosis. Although this is a well written manuscript, the study described in this manuscript is limited to the preliminary observation on the crude extract’s antifungal activity against S. globose. There are several reports describing the antifungal activities of W. somnifera extracts. The current study only adds another fungal species to the existing list of fungal pathogens that are susceptible to W. somnifera extracts. Therefore, I am of the opinion that the manuscript in its current form is not suitable for the publication in PLOS Neglected Tropical Diseases and the manuscript need a major revision with potential attempts to identify the active antifungal component of the extract and its plausible mode of action. Major Comments: 1) One of the major weakness of the manuscript is the activities described are limited to the crude extract. The HPLC chromatogram given on the Fig 5, clearly indicates many separable peaks. The authors need to purify these compounds and test the activity of purified peaks to find the potential antifungal molecule/s. Some of the molecules are commercially available, so authors may use commercially available compounds or the purified one. If no individual peaks show any activity against S. globose, the authors could then employ synergistic assays to validate the compounds activity in combinations. If the active peak represents an unknown molecule, the authors are recommended to do the characterization of the same. 2) On page 13 lines 273-281 and Fig 3 D: The authors used Sorbitol and ergosterol to assess the potential mode of action of WSWE. The results shown in the Figure and text given indicates that there is only a 2-3 folds difference in the MFC50 in the presence of these molecules. The authors are suggested to do statistical analysis of their data given on Fig 3D to validate whether that difference is significant. Also, data given on the Fig3D further indicate that at MFC80 the difference will be meager, unlike AMB data, where difference between +/- Ergosterol is significantly different. I would also suggest the authors to include the growth curves of the S. globose with and without ergosterol and sorbitol as supplementary document, so that readers are aware that these compounds doesn’t affect the overall growth curve. Minor comments: 1) Page 12 lines 247-249: “In S. globosa, like other fungi, amphotercin B is known to bind the membrane-associated ergosterol creating pores leading to leakage of intracellular contents and eventual cell death [11,17]. This indicated that WSWE could be affecting cell membrane”. The text or data preceding this statement doesn’t indicate WSWE affect the membrane integrity. Being more active against metabolically active cells doesn’t imply that mode of action of AMB and WEWE are similar. In fact, many known antimicrobial agents show potent activity towards metabolically active cells. 2) Page 17 lines 366-373: It is not clear what the authors are referring to. None of the figures or texts given in the manuscript indicates the given values. Further, the authors need to use caution while claiming a multi target mechanism for WESE extract, as there is no solid evidence for any target. Reviewer #4: This is as study evaluating the anti fungal effect of whole extract of W. somnifera on a single S. globosa strain. Questions in Methods sections: 1. Is fungal culture medium the same than BHI? or are you referring to a different medium? please specify and comment the composition of the medium. 2) The rational behind ergosterol and sorbitol assays is not clear. Please specify. 3) I think the terms MIC50 and MIC80 are wrongly used here. 4) what were the standards used for the HPLC analysis and how is that you choose them? This section is not clear. how you identified withaferin, withanoline etc? I would suggest the authors that 1. In your introduction, tell less about sporotrichosis and more about the public health problem and above all more about the how is currently used? what type of previous studies have been done to study it? what is its range of activity? what previous studies have been published. 2.Discussion is repetitive compared to the introduction. 3. The authors didn't explain about how the data analysis was done? how many times these experiments were carried out? 4. Authors used only one strain, hence they should been using the terms MIC50, MIC90. 5. I think assays of minimal fungicidal concentration would enrich this WSWE manuscript. As well as TEM before and after the efect of WSWE 6. Testing more strains would be useful 7. Determination of which component out of the ones found by HPLC is the one with the real anti fungal capacity. -------------------- PLOS authors have the option to publish the peer review history of their article (what does this mean?). 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Data Requirements: Please note that, as a condition of publication, PLOS' data policy requires that you make available all data used to draw the conclusions outlined in your manuscript. Data must be deposited in an appropriate repository, included within the body of the manuscript, or uploaded as supporting information. This includes all numerical values that were used to generate graphs, histograms etc.. For an example see here: http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001908#s5. Reproducibility: To enhance the reproducibility of your results, we recommend that you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. Additionally, PLOS ONE offers an option to publish peer-reviewed clinical study protocols. 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| Revision 1 |
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Dear Dr. Varshney We are pleased to inform you that your manuscript 'Withania somnifera (L.) Dunal Whole-plant Extracts Exhibited Anti-Sporotrichotic Effects by Destabilizing Peripheral Integrity of Sporothrix globosa Yeast Cells' has been provisionally accepted for publication in PLOS Neglected Tropical Diseases. Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests. Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated. IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript. Should you, your institution's press office or the journal office choose to press release your paper, you will automatically be opted out of early publication. We ask that you notify us now if you or your institution is planning to press release the article. All press must be co-ordinated with PLOS. Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases. Best regards, Angel Gonzalez, Ph.D. Associate Editor PLOS Neglected Tropical Diseases Christine Petersen Deputy Editor PLOS Neglected Tropical Diseases *********************************************************** |
| Formally Accepted |
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Dear Dr Varshney, We are delighted to inform you that your manuscript, "Withania somnifera (L.) Dunal Whole-plant Extracts Exhibited Anti-Sporotrichotic Effects by Destabilizing Peripheral Integrity of Sporothrix globosa Yeast Cells," has been formally accepted for publication in PLOS Neglected Tropical Diseases. We have now passed your article onto the PLOS Production Department who will complete the rest of the publication process. All authors will receive a confirmation email upon publication. The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any scientific or type-setting errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript. Note: Proofs for Front Matter articles (Editorial, Viewpoint, Symposium, Review, etc...) are generated on a different schedule and may not be made available as quickly. Soon after your final files are uploaded, the early version of your manuscript will be published online unless you opted out of this process. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers. Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases. Best regards, Shaden Kamhawi co-Editor-in-Chief PLOS Neglected Tropical Diseases Paul Brindley co-Editor-in-Chief PLOS Neglected Tropical Diseases |
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