Peer Review History
| Original SubmissionApril 16, 2021 |
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Dear Dr. Wiratsudakul, Thank you very much for submitting your manuscript "Current characteristics of animal rabies cases in Thailand and relevant risk factors identified by a spatial modeling approach" for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. In light of the reviews (below this email), we would like to invite the resubmission of a significantly-revised version that takes into account the reviewers' comments. We cannot make any decision about publication until we have seen the revised manuscript and your response to the reviewers' comments. Your revised manuscript is also likely to be sent to reviewers for further evaluation. When you are ready to resubmit, please upload the following: [1] A letter containing a detailed list of your responses to the review comments and a description of the changes you have made in the manuscript. Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. [2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file). Important additional instructions are given below your reviewer comments. Please prepare and submit your revised manuscript within 60 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email. Please note that revised manuscripts received after the 60-day due date may require evaluation and peer review similar to newly submitted manuscripts. Thank you again for your submission. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments. Sincerely, Marilia Sá Carvalho Associate Editor PLOS Neglected Tropical Diseases Guilherme Werneck Deputy Editor PLOS Neglected Tropical Diseases *********************** Reviewer's Responses to Questions Key Review Criteria Required for Acceptance? As you describe the new analyses required for acceptance, please consider the following: Methods -Are the objectives of the study clearly articulated with a clear testable hypothesis stated? -Is the study design appropriate to address the stated objectives? -Is the population clearly described and appropriate for the hypothesis being tested? -Is the sample size sufficient to ensure adequate power to address the hypothesis being tested? -Were correct statistical analysis used to support conclusions? -Are there concerns about ethical or regulatory requirements being met? Reviewer #1: - at line 121 authors provide the general formula for a GAM model. However, it’s note possible to check which was the final model used to produce the results. Based on the figure 2 seems that the smooth function was used for Main road, Distance to border, Density of Owned Dog, Human Population Density, Density of cattle population and Month of Rabies occurrence. Is it correct? which function did the authors used for each of these? - Authors uses the term Spatiotemporal. However, while is possible to see that author using a kind of connectivity matrix, which I believe that was used to lead with spatial auto-correlation the same is not true for time. Could the authors explain better how did address the problem. Again, I believe that specifying the final model could be very helpful here Reviewer #2: The objectives are clearly articulated with the hypothesis presented. The design of the study is partially appropriate.The analysis of spatio-temporal patterns were compromised due to the short period of time worked by the authors The population is well described and appropriate for the hypotheses being tested, despite the limitations inherent in the use of secondary data from surveillance systems. Due to the time interval used (2 years), the sample size is insufficient to guarantee adequate power to address the tested hypotheses. In addition, the authors did not present a sample design plan. The statistical analysis used is adequate to support the conclusions. Not describe the necessary ethical authorizations for obtaining animal samples. -------------------- Results -Does the analysis presented match the analysis plan? -Are the results clearly and completely presented? -Are the figures (Tables, Images) of sufficient quality for clarity? Reviewer #1: - I believe that table two will be more informative if the authors present point estimates and confidence interval instead of p-value. - Generally when you try to set a predictive model is common to check which features have the biggest impact on predictions. Could you please provide this information. Reviewer #2: The analyzes presented are in accordance with the analysis plan, despite the limitations indicated in the study methodology (Short time interval and use of secondary bases from local surveillance systems) The results are presented in a clear and complete manner, despite the lack of information in the initial descriptive analysis, for some variables obtained from the surveillance bases The figures shown are of sufficient quality. -------------------- Conclusions -Are the conclusions supported by the data presented? -Are the limitations of analysis clearly described? -Do the authors discuss how these data can be helpful to advance our understanding of the topic under study? -Is public health relevance addressed? Reviewer #1: (No Response) Reviewer #2: The methodological limitations of the manuscript directly impact the quality of the results presented. The authors did not clearly present the limitations of the analysis, such as the incompleteness of the data obtained in the surveillance services, and the short time used in the analyzes, which substantially prevents adequate interpretations of space-time patterns and seasonality. In addition, the authors do not adequately discuss how the data can be useful to advance the understanding of the topic under study, limiting themselves to bringing local and regional aspects; And public health relevance has been poorly addressed, and could be further developed. -------------------- Editorial and Data Presentation Modifications? Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”. Reviewer #1: - change model set to train set Reviewer #2: Include information on ethical procedures related to obtaining animal samples (if available). To address in the discussion global aspects related to the findings found in the study and bring the relevance of the conclusions to the field of public health. -------------------- Summary and General Comments Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed. Reviewer #1: In the study “Current characteristics of animal rabies cases in Thailand and relevant risk factors identified by a spatial modeling approach” Wiratsudakul et al. describe the application of GAM model for generate risk maps of rabies using secondary data from Thailand. The article is well written and built on a sound premise and hypothesis. The results are interesting and can be relevant, specially for public health and those interested in applying statistical/computational methods to improve health surveillance. However there are some major points that need to be clarified before the same could be published Reviewer #2: Original study with relevance for the area, and of interest to researchers, professionals and policy makers specific to animal and human rabies. Apparently, there is no potential interest for researchers or professionals outside the area. Partially rigorous methodology, with conclusions justified by the evidence presented, but with important limitations in the methodology that directly impact the interpretation of the results presented. There was no mention in the manuscript of ethical approvals in the animal field. It would be very important extend the study period for the conclusions about temporal space patterns become robust. Working with only two years, limits interpretation of the findings, since only "epidemic" years were included. This is also reflected in the active / passive surveillance service, which, theoretically, may be more attentive and agile in recent years, due to the significant increase in diagnosed / reported cases. In the introduction, the authors provide a historical overview of notifications of animal and human rabies in the studied territory. It is suggested to include in the analysis a broader period of time, for example, 10 years, so that the historical series includes a significant period of time, which better reflects the reality of rabies in the territory. -------------------- PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No Figure Files: While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Data Requirements: Please note that, as a condition of publication, PLOS' data policy requires that you make available all data used to draw the conclusions outlined in your manuscript. Data must be deposited in an appropriate repository, included within the body of the manuscript, or uploaded as supporting information. This includes all numerical values that were used to generate graphs, histograms etc.. For an example see here: http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001908#s5. 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| Revision 1 |
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Dear Dr. Wiratsudakul, We are pleased to inform you that your manuscript 'Current characteristics of animal rabies cases in Thailand and relevant risk factors identified by a spatial modeling approach' has been provisionally accepted for publication in PLOS Neglected Tropical Diseases. Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests. Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated. IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript. Should you, your institution's press office or the journal office choose to press release your paper, you will automatically be opted out of early publication. We ask that you notify us now if you or your institution is planning to press release the article. All press must be co-ordinated with PLOS. Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases. Best regards, Marilia Sá Carvalho Associate Editor PLOS Neglected Tropical Diseases Guilherme Werneck Deputy Editor PLOS Neglected Tropical Diseases *********************************************************** Reviewer's Responses to Questions Key Review Criteria Required for Acceptance? As you describe the new analyses required for acceptance, please consider the following: Methods -Are the objectives of the study clearly articulated with a clear testable hypothesis stated? -Is the study design appropriate to address the stated objectives? -Is the population clearly described and appropriate for the hypothesis being tested? -Is the sample size sufficient to ensure adequate power to address the hypothesis being tested? -Were correct statistical analysis used to support conclusions? -Are there concerns about ethical or regulatory requirements being met? Reviewer #1: The objectives are clearly described with the statistical analysis adequate to answer the hypothesis presented. Reviewer #2: The objectives are clearly articulated with the hypothesis presented. The study design is appropriate, as it aims to meet the proposal of analyzing monthly spatiotemporal patterns. The population is well described and appropriate for the hypotheses being tested, despite the limitations inherent in the use of secondary data from surveillance systems. The sample size is sufficient to ensure adequate power to address the tested hypotheses. The statistical analysis used is adequate to support the conclusions. ********** Results -Does the analysis presented match the analysis plan? -Are the results clearly and completely presented? -Are the figures (Tables, Images) of sufficient quality for clarity? Reviewer #1: The analysis used in the paper is adequate with the objectives pruposed. Reviewer #2: The analyzes presented are in accordance with the analysis plan. The results are presented clearly and completely. The figures shown are of sufficient quality. ********** Conclusions -Are the conclusions supported by the data presented? -Are the limitations of analysis clearly described? -Do the authors discuss how these data can be helpful to advance our understanding of the topic under study? -Is public health relevance addressed? Reviewer #1: The conclusion are supported by the results found Reviewer #2: The methodological design presented is of high quality and offers adequate results. The analyzes performed are suitable for interpretations of spatiotemporal patterns and seasonality. Authors adequately discuss how data can be useful to advance the understanding of the topic under study, bringing local and regional aspects of relevance; Public health impact was adequately addressed. ********** Editorial and Data Presentation Modifications? Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”. Reviewer #1: (No Response) Reviewer #2: (No Response) ********** Summary and General Comments Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed. Reviewer #1: (No Response) Reviewer #2: Original study with relevance to the area, and of interest to researchers, practitioners and policy makers specific to animal and human rabies. There is potential interest for researchers or professionals from outside the area. Rigorous methodology, with conclusions justified by the evidence presented. Researchers adequately justified the methodological proposal presented. And the results were properly interpreted. Researchers justified the absence of ethical approvals in the animal area. ********** PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No Reviewer #2: No |
| Formally Accepted |
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Dear Dr. Wiratsudakul, We are delighted to inform you that your manuscript, "Current characteristics of animal rabies cases in Thailand and relevant risk factors identified by a spatial modeling approach," has been formally accepted for publication in PLOS Neglected Tropical Diseases. We have now passed your article onto the PLOS Production Department who will complete the rest of the publication process. All authors will receive a confirmation email upon publication. The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any scientific or type-setting errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript. Note: Proofs for Front Matter articles (Editorial, Viewpoint, Symposium, Review, etc...) are generated on a different schedule and may not be made available as quickly. Soon after your final files are uploaded, the early version of your manuscript will be published online unless you opted out of this process. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers. Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases. Best regards, Shaden Kamhawi co-Editor-in-Chief PLOS Neglected Tropical Diseases Paul Brindley co-Editor-in-Chief PLOS Neglected Tropical Diseases |
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