Peer Review History

Original SubmissionMay 1, 2020
Decision Letter - Alvaro Acosta-Serrano, Editor, Paul O. Mireji, Editor

Dear Dr Nnko,

Thank you very much for submitting your manuscript "Potential Impacts of Climate Change on Geographical Distribution of Three Primary Vectors of African Trypanosomiasis in Tanzania Maasai Steppe; G. m. morsitans, G. pallidipes and G. swynnertoni" for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. In light of the reviews (below this email), we would like to invite the resubmission of a significantly-revised version that takes into account the reviewers' comments.

We cannot make any decision about publication until we have seen the revised manuscript and your response to the reviewers' comments. Your revised manuscript is also likely to be sent to reviewers for further evaluation.

When you are ready to resubmit, please upload the following:

[1] A letter containing a detailed list of your responses to the review comments and a description of the changes you have made in the manuscript. Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out.

[2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file).

Important additional instructions are given below your reviewer comments.

Please prepare and submit your revised manuscript within 60 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email. Please note that revised manuscripts received after the 60-day due date may require evaluation and peer review similar to newly submitted manuscripts.

Thank you again for your submission. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments.

Sincerely,

Alvaro Acosta-Serrano

Deputy Editor

PLOS Neglected Tropical Diseases

Alvaro Acosta-Serrano

Deputy Editor

PLOS Neglected Tropical Diseases

***********************

Reviewer's Responses to Questions

Key Review Criteria Required for Acceptance?

As you describe the new analyses required for acceptance, please consider the following:

Methods

-Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

-Is the study design appropriate to address the stated objectives?

-Is the population clearly described and appropriate for the hypothesis being tested?

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

-Were correct statistical analysis used to support conclusions?

-Are there concerns about ethical or regulatory requirements being met?

Reviewer #1: (No Response)

Reviewer #2: The objective of the study is clearly articulated with a clear testable hypothesis stated and the study design is appropriate, population described. The statistical analysis supports the conclusion, but use of a single wet season and a single dry season may not be enough to make proper conclusions for such a study. One season may not give representative data. It would be good if they could consider data for atleast 3 wet seasons and 3 dry seasons.

--------------------

Results

-Does the analysis presented match the analysis plan?

-Are the results clearly and completely presented?

-Are the figures (Tables, Images) of sufficient quality for clarity?

Reviewer #1: (No Response)

Reviewer #2: Yes

--------------------

Conclusions

-Are the conclusions supported by the data presented?

-Are the limitations of analysis clearly described?

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

-Is public health relevance addressed?

Reviewer #1: (No Response)

Reviewer #2: Yes

--------------------

Editorial and Data Presentation Modifications?

Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”.

Reviewer #1: (No Response)

Reviewer #2: I have suggested published articles of previous work in this area for the authors to read before making certain statements, details are in the manuscript (attached). These are minor revisions in the abstract and methods.

--------------------

Summary and General Comments

Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed.

Reviewer #1: The study outlined in the manuscript deployed MaxEnt species distribution modelling (SDM) and ecological niche modelling tools to depict likely distribution patterns of three G. m. morsitans, G. pallidipes and G. swynnertoni tsetse fly species in Tanzania Maasai Steppe based on the current climate profile and predicted change by mid-century under Representative Concentration Pathway (RCP) 4.5 scenario. The results predict that habitable areas may decrease by up to 23.13%, 12.9% and 22.8% for the three species, respectively, by 2050.

The study appears to have been well conducted. However, it requires significant editorial correction or improvement, and specially the Discussion part, which appears to be too wordy and thematically repetitive.

Some corrections and changes are indicated below.

Line 66: ‘dairy’, not ‘diary’.

Line 107: ‘practising’ instead of ‘practicing’?

Lines 127-30, 2nd part of the sentence: change the second part of the sentence from ‘including to predict the probability of occurrence of species across space and time..’.

Line 140: change ‘plays’ to ‘play’.

Line 141: ‘…..since blood meals are the only tsetse fly nutrition…….’.

Line 209-213: ‘…… the model showed that currently 32% (19,225 km2) of the entire Maasai Steppe (≈ 60,000 km2) has suitable climate for G. m. morsitans, but this would shrink to 7.4% (4,447.34 km2) by 2050’.

Line 258-262: The three sentences appear to repeat more or less the same message……it can be condensed into one or two sentences.

Reviewer #2: The work is fit for publication if they read the articles i have suggested and make the necessary adjustments.

--------------------

PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

Figure Files:

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org.

Data Requirements:

Please note that, as a condition of publication, PLOS' data policy requires that you make available all data used to draw the conclusions outlined in your manuscript. Data must be deposited in an appropriate repository, included within the body of the manuscript, or uploaded as supporting information. This includes all numerical values that were used to generate graphs, histograms etc.. For an example see here: http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001908#s5.

Reproducibility:

To enhance the reproducibility of your results, PLOS recommends that you deposit laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see https://journals.plos.org/plosntds/s/submission-guidelines#loc-methods

Attachments
Attachment
Submitted filename: Comments on PNTD.pdf
Attachment
Submitted filename: PNTD-D-20-00736_Agapitus.pdf
Revision 1

Attachments
Attachment
Submitted filename: Nnko_Response to the Review Comments_28 September 2020.doc
Decision Letter - Alvaro Acosta-Serrano, Editor, Paul O. Mireji, Editor

Dear Dr Nnko,

We are pleased to inform you that your manuscript 'Potential Impacts of Climate Change on Geographical Distribution of Three Primary Vectors of African Trypanosomiasis in Tanzania Maasai Steppe; G. m. morsitans, G. pallidipes and G. swynnertoni' has been provisionally accepted for publication in PLOS Neglected Tropical Diseases.

Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests.

Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated.

IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript.

Should you, your institution's press office or the journal office choose to press release your paper, you will automatically be opted out of early publication. We ask that you notify us now if you or your institution is planning to press release the article. All press must be co-ordinated with PLOS.

Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases.

Best regards,

Paul O. Mireji, PhD

Associate Editor

PLOS Neglected Tropical Diseases

Alvaro Acosta-Serrano

Deputy Editor

PLOS Neglected Tropical Diseases

***********************************************************

Reviewer's Responses to Questions

Key Review Criteria Required for Acceptance?

As you describe the new analyses required for acceptance, please consider the following:

Methods

-Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

-Is the study design appropriate to address the stated objectives?

-Is the population clearly described and appropriate for the hypothesis being tested?

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

-Were correct statistical analysis used to support conclusions?

-Are there concerns about ethical or regulatory requirements being met?

Reviewer #1: Yes, the objectives of the study are clear. The study design based on Beijing Climate Center (BCC-CSM1-1) and and and the RCP 4.5 stabilization scenario are appropriate. Given it focus on climate based ecological niche modeling, there are no concerns about ethical or regulatory requirements.

Reviewer #3: The authors have clearly set out the study and provided an informative way of predicting what may happen to the three species of tsetse flies when the natural habitat is influenced by habitat. The design looks at a point in time and uses the point in time to estimate what the situation may be like in another point in time in the future based on a few selected factors. The models used present the possibility for estimating the distribution of the three species. however the weak point is that the study was based on 2 seasons and the prediction is based on only one year of study. The sample size may be based on a period when the fly behaviour was modified and may not have been a true representation of the conditions. I however feel the paper's intention was to demonstrate the feasibility of use of the methodology and more accurate estimates may be calculated based on a larger study period. I accept the paper as a demonstration of the technology.

**********

Results

-Does the analysis presented match the analysis plan?

-Are the results clearly and completely presented?

-Are the figures (Tables, Images) of sufficient quality for clarity?

Reviewer #1: The results presented match the modeling protocol used.

Reviewer #3: Despite the short study period the results were analysed in an exciting manner and are clearly presented with appropriate figures for emphasis. Using the data available the authors have made a good job of the analysis. The figures look clear but if there is a way of making them clearer that would benefit the reader more

**********

Conclusions

-Are the conclusions supported by the data presented?

-Are the limitations of analysis clearly described?

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

-Is public health relevance addressed?

Reviewer #1: Yes, conclusions are based on results of the modelling protocol. The results are interesting and portray possible positive impact of climate change on tsetse-related human and animal health.

Reviewer #3: The conclusions drawn have been largely based on the data obtained and the observation that the data used is limited. It is encouraging to note that the authors concede the matter of data size or period of study as a limitation. The authors have suggested various scenarios where the out can be used in a manner that benefits different categories of people.

**********

Editorial and Data Presentation Modifications?

Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”.

Reviewer #1: (i) Line 66-68: 'For instance, trypanosomiasis in livestock causes loss of over 4 billion USD due to 70% reduction of cattle density, 50% reduction in diary'... the authors must have meant 'dairy', not 'diary'.

(ii) Line 85: 'Specifically, these models relies on statistical correlations between species'....'rely' instead of 'relies'?

(iii) Line 135-6: 'Since blood meals is the only known tsetse fly nutrition, no information is currently known on effects of precipitation on tsetse fly species except reports that indicate fluctuation of abundance during rainy season'......'available' instead of 'known'?

(iv) Can the authors provide the rationale on the deployment of RCP 4.5 stabilization scenario?

Reviewer #3: After going through the manuscript, my overall impression is to accept the paper as it demonstrates a method of prediction that may be useful to tsetse researchers and control. There are some minor typing errors which I believe the Authors may find when they proof read their manuscript.

**********

Summary and General Comments

Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed.

Reviewer #1: In addition to the few suggestions made above under 'Editorial and Data Presentation Modifications', I think the authors need to go through the manuscript carefully and make some editorial changes or improvements.

Reviewer #3: The manuscript has focussed on demonstrating the reliability or accuracy of one method of predicting the distribution of three species of tsetse flies prevalent in an area where risk of contracting disease is high for both animals and the people. The study attempts to address a real problem by providing a cost reducing means for planners. The key factors of temperature as minimum and maximum, altitude and indirectly rainfall that have been used in the study are already used in planning and the tool may help to reduce planning costs by enhancing the likely places with tsetse flies in an area. This is a modified method that has been used before and it is more refined. The study demonstrates the feasibility for use despite having been based on data from a short period of study. The methodology has no direct involvement of humans and animals but one hopes that the team responsible for field data collection was made aware of the risks associated with the study and that they were sufficiently protected as field staff.

**********

PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #3: No

Formally Accepted
Acceptance Letter - Alvaro Acosta-Serrano, Editor, Paul O. Mireji, Editor

Dear Dr Nnko,

We are delighted to inform you that your manuscript, "Potential Impacts of Climate Change on Geographical Distribution of Three Primary Vectors of African Trypanosomiasis in Tanzania Maasai Steppe; G. m. morsitans, G. pallidipes and G. swynnertoni," has been formally accepted for publication in PLOS Neglected Tropical Diseases.

We have now passed your article onto the PLOS Production Department who will complete the rest of the publication process. All authors will receive a confirmation email upon publication.

The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any scientific or type-setting errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript. Note: Proofs for Front Matter articles (Editorial, Viewpoint, Symposium, Review, etc...) are generated on a different schedule and may not be made available as quickly.

Soon after your final files are uploaded, the early version of your manuscript will be published online unless you opted out of this process. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers.

Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases.

Best regards,

Shaden Kamhawi

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

Paul Brindley

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

Open letter on the publication of peer review reports

PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.

We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.

Learn more at ASAPbio .