Peer Review History

Original SubmissionMarch 26, 2020
Decision Letter - Olaf Horstick, Editor, Pikka Jokelainen, Editor

Dear Dr. Tarekegn,

Thank you very much for submitting your manuscript "Potential risk factors associated with Toxoplasma gondii infection in pregnant women and HIV infected individuals in Ethiopia: A systematic review and Meta-analysis" for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. In light of the reviews (below this email), we would like to invite the resubmission of a significantly-revised version that takes into account the comments.

We cannot make any decision about publication until we have seen the revised manuscript and your response to the reviewers' comments. Your revised manuscript is also likely to be sent to reviewers for further evaluation.

When you are ready to resubmit, please upload the following:

[1] A letter containing a detailed list of your responses to the review comments and a description of the changes you have made in the manuscript. Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out.

[2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file).

Important additional instructions are given below your reviewer comments.

Please prepare and submit your revised manuscript within 60 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email. Please note that revised manuscripts received after the 60-day due date may require evaluation and peer review similar to newly submitted manuscripts.

Thank you again for your submission. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments.

Sincerely,

Olaf Horstick, FFPH(UK)

Associate Editor

PLOS Neglected Tropical Diseases

Pikka Jokelainen

Deputy Editor

PLOS Neglected Tropical Diseases

***********************

Reviewer #1:

This is a work of high importance and it is generally well conducted. I have a couple of minor but essential comments that should be addressed. They can be found as comments in the attached document.

Reviewer #3: The main problem (in my opinion) for this study is novelty of results, as we know there are some recent global and regional meta-analyses considering prevalence and risk factors of T. gondii in pregnant women and HIV patients; and data from Ethiopia is present in them.

Introduction

* There are four global studies with regard to acute and latent toxoplasmosis in pregnant women (https://doi.org/10.1371/journal.pntd.0007807 and https://doi.org/10.1016/j.cmi.2020.01.008) and in HIV patients (10.1097/QAD.0000000000002424 and http://dx.doi.org/10.1016/S2352-3018(17)30005-X). I think use of results of these studies is informative for introduction. Moreover in discussion results of present study should be compared with global and regional prevalences according to results from abovementioned studies.

Methods

* Data extraction: please mention details for risk factors.

* Meta-analysis: the studies by Foroutan-Rad et al. and Khalkhali et al. could not be a protocol. Please refer to original study by DerSimonian and Laird (1986).

* In following sentence, used reference is invalid and authors should add valid reference. "Cochran's Q-statistics and inverse variance index (I2) were computed to determine the heterogeneity and inconsistency among studies, respectively [2]."

* I think only random effects model is proper for estimation of pooled prevalence rates.

Results

* 3.2. Meta-analysis and bias assessment: please add 95% CI related with pooled prevalences.

* Results for prevalence rates presented in text is inconsistent with forest plots (figure 2 and 3).

* All fig are numbered as figure 1. Please correct them.

There are several editorial errors that should be modified in revise.

Deputy Editor:

The Reviewers find the work interesting but there are several points that need to be clarified before the work can be fully evaluated. Based on the evaluation of the work by three Reviewers, Associate Editor and myself, the decision is ‘major revision’. We are looking forward to receiving the revised manuscript.

Comments from Deputy Editor:

The author summary should be a summary of this work. I recommend to largely rewrite the current summary.

The conclusions and recommendations given must be based on this study. What is meant by ‘burden’ in the first concluding sentence? Can it be concluded directly from this study that routine serological screening and health promotion should be started? Can the aspects about cats mentioned in the last paragraph be concluded from this study?

This study was limited to one country. Have similar studies been made in other countries? I expect in most countries, the number of studies conducted is too low for a similar study – this could be discussed.

Relevant basic background information about the setting of the study (e.g. population of Ethiopia) should be given. It would be good to emphasize why this work was important to do, in particular the importance to international audience. It is important that the setting is repeated in the Discussion, to make it clear the results are from studies performed in one country. E.g. the first sentence of the last paragraph should specify the setting.

Limitations of the study need to be discussed more.

Please check the use of the key expressions everywhere in the manuscript very carefully. In particular, ‘toxoplasmosis’ is usually used for the clinical disease; for the subclinical infection detected by serology, ‘T. gondii infection’ is better expression. For example, please change ‘Seroprevalence of toxoplasmosis’-> T. gondii seroprevalence; and please rephrase ‘95% confidence intervals (Cis) of toxoplasmosis’. The name of the parasite should be written in full (Toxoplasma gondii, in Italics)

Please check that abbreviations are explained when used for the first time (PRF).

Avoid using the word ‘only’ in results.

Table 1: Sampling method ‘simple’ should be explained.

The variable ‘age’ was dichotomized; this needs to be mentioned in Methods.

Consider changing ‘Ethiopian’ to ‘in Ethiopia’, if the inclusion criteria of the original studies did not include the nationality of the individuals.

In the Discussion, the sentence starting ‘Higher Toxoplasma seroprevalence was reported’ is confusing, as two of the three estimates mentioned are not higher than the pooled estimates obtained. Ref nr 48 was not included in the study, but it is used for comparison. Please check/clarify.

In the Discussion, the sentence starting ‘Comparable findings…’ puts the study in the global setting, but, the references used (nr 52-58) do not cover different areas across the world very well. In some parts of the world, the seroprevalence is clearly lower. I can see an opportunity to widen the interest of this work by including a wider scope here.

‘infected meat’ -> meat of infected animals

‘also depends on’ -> has also been associated with

‘infection… has been reported to be influenced by’ – please edit, the infection was likely not shown to be influenced.

The sentences providing possible explanations for the higher seroprevalence in older age groups needs checking and editing. Is it reasoned to mention only oocysts?

The discussion about cats would benefit from editing; please check that the sentences are supported by the references.

Please rephrase the sentence using expression ‘contaminated individuals/animals’.

Please make sure the figure legends provide enough information so that the figures can also “stand alone” without the text. E.g. the parasite and the country should be mentioned

Was the quality of the included studies evaluated in any way? If not, why?

Including the raw data that was extracted as supplementary material would be a very good addition.

Figure Files:

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org.

Data Requirements:

Please note that, as a condition of publication, PLOS' data policy requires that you make available all data used to draw the conclusions outlined in your manuscript. Data must be deposited in an appropriate repository, included within the body of the manuscript, or uploaded as supporting information. This includes all numerical values that were used to generate graphs, histograms etc.. For an example see here: http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001908#s5.

Reproducibility:

To enhance the reproducibility of your results, PLOS recommends that you deposit laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see https://journals.plos.org/plosntds/s/submission-guidelines#loc-methods

Attachments
Attachment
Submitted filename: PNTD-D-20-00491_reviewer_anonymized.pdf
Revision 1

Attachments
Attachment
Submitted filename: PLOS review.docx
Decision Letter - Olaf Horstick, Editor, Pikka Jokelainen, Editor

Dear Dr. Tarekegn,

Thank you very much for submitting your manuscript "Potential risk factors associated with seropositivity for Toxoplasma gondii among pregnant women and HIV infected individuals in Ethiopia: A systematic review and Meta-analysis" for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. The reviewers appreciated the attention to an important topic. Based on the reviews, we are likely to accept this manuscript for publication, providing that you modify the manuscript according to the review recommendations.

Please prepare and submit your revised manuscript within 30 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email.  

When you are ready to resubmit, please upload the following:

[1] A letter containing a detailed list of your responses to all review comments, and a description of the changes you have made in the manuscript. 

Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out

[2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file).

Important additional instructions are given below your reviewer comments.

Thank you again for your submission to our journal. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments.

Sincerely,

Olaf Horstick, FFPH(UK)

Associate Editor

PLOS Neglected Tropical Diseases

Pikka Jokelainen

Deputy Editor

PLOS Neglected Tropical Diseases

***********************

Reviewer's Responses to Questions

Key Review Criteria Required for Acceptance?

As you describe the new analyses required for acceptance, please consider the following:

Methods

-Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

-Is the study design appropriate to address the stated objectives?

-Is the population clearly described and appropriate for the hypothesis being tested?

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

-Were correct statistical analysis used to support conclusions?

-Are there concerns about ethical or regulatory requirements being met?

Reviewer #1: (No Response)

Reviewer #3: (No Response)

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Results

-Does the analysis presented match the analysis plan?

-Are the results clearly and completely presented?

-Are the figures (Tables, Images) of sufficient quality for clarity?

Reviewer #1: (No Response)

Reviewer #3: (No Response)

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Conclusions

-Are the conclusions supported by the data presented?

-Are the limitations of analysis clearly described?

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

-Is public health relevance addressed?

Reviewer #1: (No Response)

Reviewer #3: (No Response)

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Editorial and Data Presentation Modifications?

Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”.

Reviewer #1: (No Response)

Reviewer #3: (No Response)

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Summary and General Comments

Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed.

Reviewer #1: This looks much better now compared to before the corrections made. However, I miss a sound justification why this systematic review was conducted in addition to those already present, which were mentioned by one of the reviewers. Within the introduction section it still reads: "no systematic studies have been conducted to determine the prevalence with associated risk factors of Toxoplasma gondii infection in pregnant women and HIV infected individuals."

Once this issue is convincingly addressed, I would recommend this SLR for publication.

Reviewer #3: (No Response)

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Reviewer #1: No

Reviewer #3: No

Figure Files:

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org.

Data Requirements:

Please note that, as a condition of publication, PLOS' data policy requires that you make available all data used to draw the conclusions outlined in your manuscript. Data must be deposited in an appropriate repository, included within the body of the manuscript, or uploaded as supporting information. This includes all numerical values that were used to generate graphs, histograms etc.. For an example see here: http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001908#s5.

Reproducibility:

To enhance the reproducibility of your results, PLOS recommends that you deposit laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. For instructions see http://journals.plos.org/plosntds/s/submission-guidelines#loc-materials-and-methods

Revision 2

Attachments
Attachment
Submitted filename: PLOS Review 2.docx
Decision Letter - Olaf Horstick, Editor, Pikka Jokelainen, Editor

Dear Dr. Tarekegn,

We are pleased to inform you that your manuscript 'Potential risk factors associated with seropositivity for Toxoplasma gondii among pregnant women and HIV infected individuals in Ethiopia: A systematic review and Meta-analysis' has been provisionally accepted for publication in PLOS Neglected Tropical Diseases.

Before your manuscript can be formally accepted you will need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests.

Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated.

IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript.

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Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases.

Best regards,

Olaf Horstick, FFPH(UK)

Associate Editor

PLOS Neglected Tropical Diseases

Pikka Jokelainen

Deputy Editor

PLOS Neglected Tropical Diseases

***********************************************************

Formally Accepted
Acceptance Letter - Olaf Horstick, Editor, Pikka Jokelainen, Editor

Dear Dr. Tarekegn,

We are delighted to inform you that your manuscript, "Potential risk factors associated with seropositivity for Toxoplasma gondii among pregnant women and HIV infected individuals in Ethiopia: A systematic review and Meta-analysis," has been formally accepted for publication in PLOS Neglected Tropical Diseases.

We have now passed your article onto the PLOS Production Department who will complete the rest of the publication process. All authors will receive a confirmation email upon publication.

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Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases.

Best regards,

Shaden Kamhawi

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

Paul Brindley

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

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