Table 1.
General information on the B. bacilliformis strains included in the study.
Table 2.
Oligonucleotide sequences used in polymerase chain reaction tests and sequencing.
Table 3.
Genomes retrieved from GenBank.
Fig 1.
Sequence logo of the multiple sequence alignment of amino acid sequence for the identification of non-synonymous mutations: A) IalB; B) GltA; C) RpoB. Amino acids are colored according to their chemical properties: polar amino acids are green, basic amino acids are blue, acidic amino acids are red, and hydrophobic amino acids are black.
Table 4.
Single nucleotide variations shown across all three sequenced regions (ialB, gltA and rpoB).
Table 5.
Predicted amino acid substitutions in B. bacilliformis presenting DNA differences compared to the B. bacilliformis reference strain KC583 (ATCC35685).
Fig 2.
Concatenated phylogenetic tree based on the ialB, gltA, rpoB genes from 20 strains isolated from Cajamarca and Ancash, and 20 genomes downloaded from GenBank.
For the construction of the tree, the NJ method with 1,000 replicates was used. The Bootstrap values are displayed between the branches respectively. The tree was made in the MEGA 7.0 program.