Leveraging paired serology to estimate the incidence of typhoidal Salmonella infection in the STRATAA study

• Jo Walker ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: jo.walker@yale.edu

  Affiliation Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, United States of America

  https://orcid.org/0000-0001-6130-8189

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• Paula Russell,

  Roles Investigation, Methodology

  Affiliations Cambridge Institute of Therapeutic Immunology and Infectious Disease, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom, Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom

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• Leanne Kermack,

  Roles Investigation, Methodology

  Affiliations Cambridge Institute of Therapeutic Immunology and Infectious Disease, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom, Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom

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• Tan Trinh Van,

  Roles Investigation, Methodology

  Affiliation The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam

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• Tran Vu Thieu Nga,

  Roles Investigation, Methodology

  Affiliation The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam

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• Elli Mylona,

  Roles Investigation, Methodology

  Affiliations Cambridge Institute of Therapeutic Immunology and Infectious Disease, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom, Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom

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• Susana Camara,

  Roles Data curation, Investigation, Supervision, Writing – review & editing

  Affiliation Oxford Vaccine Group, Department of Paediatrics, University of Oxford, Oxford, United Kingdom

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• Young Chan Kim,

  Roles Investigation, Writing – review & editing

  Affiliation International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh

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• Sonu Shrestha,

  Roles Investigation

  Affiliation International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh

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• Arne Gehlhaar,

  Roles Investigation

  Affiliation International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh

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• Josefin Bartholdson Scott,

  Roles Investigation, Methodology

  Affiliations Cambridge Institute of Therapeutic Immunology and Infectious Disease, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom, Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom

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• Farhana Khanam,

  Roles Investigation, Project administration, Supervision, Writing – review & editing

  Affiliation Oxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, Nepal

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• Mila Shakya,

  Roles Data curation, Investigation, Supervision

  Affiliations Patan Academy of Health Sciences, Patan Hospital, Lalitpur, Nepal, Malawi-Liverpool-Wellcome Research Programme, Blantyre, Malawi

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• Deus Thindwa,

  Roles Data curation, Investigation

  Affiliations College of Medicine, University of Malawi, Blantyre, Malawi, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom

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• Melita A. Gordon,

  Roles Investigation, Project administration, Supervision, Writing – review & editing

  Affiliations College of Medicine, University of Malawi, Blantyre, Malawi, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom, Nuffield Department of Medicine, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, United Kingdom

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• Buddha Basnyat,

  Roles Investigation, Project administration, Supervision

  Affiliations Oxford University Clinical Research Unit, Patan Academy of Health Sciences, Kathmandu, Nepal, UCLA Fielding School of Public Health, University of California Los Angeles, California, United States of America

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• John D. Clemens,

  Roles Investigation, Project administration, Writing – review & editing

  Affiliations International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh, International Vaccine Institute, Seoul, South Korea, Korea University Vaccine Innovation Center, Seoul, South Korea, Research Department of Infection, Division of Infectious Diseases, University College London, London, United Kingdom

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• Firdausi Qadri,

  Roles Investigation, Project administration, Supervision, Writing – review & editing

  Affiliation International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh

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• Robert S. Heyderman,

  Roles Investigation, Writing – review & editing

  Affiliations Malawi-Liverpool-Wellcome Research Programme, Blantyre, Malawi, Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom

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• Christiane Dolecek,

  Roles Investigation, Supervision

  Affiliation NIHR Oxford Biomedical Research Centre, Oxford, United Kingdom

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• Susan Tonks,

  Roles Investigation, Project administration, Writing – review & editing

  Affiliation Oxford Vaccine Group, Department of Paediatrics, University of Oxford, Oxford, United Kingdom

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• Thomas C. Darton,

  Roles Investigation, Writing – review & editing

  Affiliation Clinical Infection Research Group, School of Medicine & Population Health, University of Sheffield, Sheffield, United Kingdom

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• Andrew J. Pollard,

  Roles Conceptualization, Investigation, Project administration, Supervision, Writing – review & editing

  Affiliations Oxford Vaccine Group, Department of Paediatrics, University of Oxford, Oxford, United Kingdom, NIHR Oxford Biomedical Research Centre, Oxford, United Kingdom

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• Stephen Baker,

  Roles Conceptualization, Investigation, Methodology, Project administration, Supervision

  Affiliations Cambridge Institute of Therapeutic Immunology and Infectious Disease, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom, Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom

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• James E. Meiring ,

  Contributed equally to this work with: James E. Meiring, Merryn Voysey, Virginia E. Pitzer

  Roles Conceptualization, Data curation, Investigation, Methodology, Supervision, Writing – review & editing

  Affiliations Malawi-Liverpool-Wellcome Research Programme, Blantyre, Malawi, College of Medicine, University of Malawi, Blantyre, Malawi, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom

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• Merryn Voysey ,

  Contributed equally to this work with: James E. Meiring, Merryn Voysey, Virginia E. Pitzer

  Roles Conceptualization, Data curation, Investigation, Methodology, Project administration, Supervision, Writing – review & editing

  Affiliations Oxford Vaccine Group, Department of Paediatrics, University of Oxford, Oxford, United Kingdom, NIHR Oxford Biomedical Research Centre, Oxford, United Kingdom

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• Virginia E. Pitzer ,

  Contributed equally to this work with: James E. Meiring, Merryn Voysey, Virginia E. Pitzer

  Roles Conceptualization, Investigation, Methodology, Supervision, Writing – review & editing

  Affiliation Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, United States of America

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•  [ ... ],
• and the STRATAA Study Group

  ¶Membership of the STRATAA Study Group is provided in the Acknowledgements

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