Phylogenetic analysis of the origin and spread of plague in Madagascar

• Luis Roger Esquivel Gomez ,

  Roles Conceptualization, Formal analysis, Investigation, Project administration, Validation, Visualization, Writing – original draft

  * E-mail: esquivelgomez@shh.mpg.de (LREG); kuehnert@shh.mpg.de (DK)

  Affiliation Transmission, Infection, Diversification & Evolution Group (tide), Max Planck Institute for Geoanthropology (formerly MPI for the Science of Human History), Jena, Germany

  https://orcid.org/0000-0002-4746-8546

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• Cyril Savin,

  Roles Data curation, Investigation, Writing – review & editing

  Affiliations Institut Pasteur, Université de Paris, Yersinia Research Unit, Paris, France, Institut Pasteur, Université de Paris, Yersinia National Reference Laboratory, Paris, France, Institut Pasteur, Université de Paris, WHO Collaborative Reference & Research Center for Plague FRA-140, Paris, France

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• Voahangy Andrianaivoarimanana,

  Roles Data curation, Investigation, Project administration, Writing – review & editing

  Affiliation Plague Unit, Central Laboratory for Plague, Institut Pasteur de Madagascar, Antananarivo, Madagascar

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• Soloandry Rahajandraibe,

  Roles Data curation, Investigation, Project administration, Writing – review & editing

  Affiliation Plague Unit, Central Laboratory for Plague, Institut Pasteur de Madagascar, Antananarivo, Madagascar

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• Lovasoa Nomena Randriantseheno,

  Roles Data curation, Investigation, Project administration, Writing – review & editing

  Affiliation Plague Unit, Central Laboratory for Plague, Institut Pasteur de Madagascar, Antananarivo, Madagascar

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• Zhemin Zhou,

  Roles Data curation, Methodology, Writing – review & editing

  Affiliations Pasteurien College, Medical school of Soochow University, Soochow University, Suzhou, China, Warwick Medical School, University of Warwick, Coventry, United Kingdom

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• Arthur Kocher,

  Roles Formal analysis, Investigation, Writing – review & editing

  Affiliations Transmission, Infection, Diversification & Evolution Group (tide), Max Planck Institute for Geoanthropology (formerly MPI for the Science of Human History), Jena, Germany, Department of Archaeogenetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany

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• Xavier Didelot,

  Roles Funding acquisition, Investigation, Writing – review & editing

  Affiliations School of Life Sciences, University of Warwick, Coventry, United Kingdom, Department of Statistics, University of Warwick, Coventry, United Kingdom

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• Minoarisoa Rajerison,

  Roles Data curation, Investigation, Project administration, Writing – review & editing

  Affiliation Plague Unit, Central Laboratory for Plague, Institut Pasteur de Madagascar, Antananarivo, Madagascar

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• Denise Kühnert

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – review & editing

  * E-mail: esquivelgomez@shh.mpg.de (LREG); kuehnert@shh.mpg.de (DK)

  Affiliation Transmission, Infection, Diversification & Evolution Group (tide), Max Planck Institute for Geoanthropology (formerly MPI for the Science of Human History), Jena, Germany

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