“Kankasha” in Kassala: A prospective observational cohort study of the clinical characteristics, epidemiology, genetic origin, and chronic impact of the 2018 epidemic of Chikungunya virus infection in Kassala, Sudan

• Hilary Bower ,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Methodology, Project administration, Resources, Supervision, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: hilary.bower@lshtm.ac.uk

  ¶‡ HB and MK share first authorship on this work. TMA, BG and TEF are joint senior authors on this work.

  Affiliation UK Public Health Rapid Support Team, London School of Hygiene & Tropical Medicine/Public Health England, London, United Kingdom

  https://orcid.org/0000-0002-1541-6637

  ⨯
• Mubarak el Karsany ,

  Roles Conceptualization, Investigation, Methodology, Project administration, Resources, Supervision, Writing – review & editing

  ¶‡ HB and MK share first authorship on this work. TMA, BG and TEF are joint senior authors on this work.

  Affiliations National Public Health Laboratory, Federal Ministry of Health, Khartoum, Sudan, Karary University, Omdurman, Sudan

  https://orcid.org/0000-0001-7149-7083

  ⨯
• Abd Alhadi Adam Hussein Adam,

  Roles Data curation, Investigation, Resources, Writing – review & editing

  Affiliation University of Kassala, Kassala, Sudan

  ⨯
• Mubarak Ibrahim Idriss,

  Roles Investigation, Writing – review & editing

  Affiliation Laboratory Division, Kassala State Ministry of Health, Kassala, Sudan

  https://orcid.org/0000-0001-6187-3348

  ⨯
• Ma’aaza Abasher Alzain,

  Roles Investigation, Writing – review & editing

  Affiliation Communicable Disease Surveillance & Events Unit, Federal Ministry of Health, Khartoum, Sudan

  ⨯
• Mohamed Elamin Ahmed Alfakiyousif,

  Roles Investigation, Writing – review & editing

  Affiliation National Public Health Laboratory, Federal Ministry of Health, Khartoum, Sudan

  ⨯
• Rehab Mohamed,

  Roles Investigation, Writing – review & editing

  Affiliation National Public Health Laboratory, Federal Ministry of Health, Khartoum, Sudan

  ⨯
• Iman Mahmoud,

  Roles Data curation, Writing – review & editing

  Affiliation National Public Health Laboratory, Federal Ministry of Health, Khartoum, Sudan

  ⨯
• Omer Albadri,

  Roles Investigation, Writing – review & editing

  Affiliation Health Emergency and Epidemic Control Directorate, Federal Ministry of Health, Khartoum, Sudan

  ⨯
• Suha Abdulaziz Alnour Mahmoud,

  Roles Investigation, Writing – review & editing

  Affiliation Kassala Teaching Hospital, Kassala, Sudan

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• Orwa Ibrahim Abdalla,

  Roles Investigation, Writing – review & editing

  Affiliation Kassala Teaching Hospital, Kassala, Sudan

  ⨯
• Mawahib Eldigail,

  Roles Investigation, Writing – review & editing

  Affiliation National Public Health Laboratory, Federal Ministry of Health, Khartoum, Sudan

  ⨯
• Nuha Elagib,

  Roles Resources, Writing – review & editing

  Affiliation National Public Health Laboratory, Federal Ministry of Health, Khartoum, Sudan

  ⨯
• Ulrike Arnold,

  Roles Investigation, Writing – review & editing

  Affiliation UK Public Health Rapid Support Team, London School of Hygiene & Tropical Medicine/Public Health England, London, United Kingdom

  ⨯
• Bernardo Gutierrez,

  Roles Formal analysis, Investigation, Resources, Software, Writing – review & editing

  Affiliation Department of Zoology, University of Oxford, Oxford, United Kingdom

  https://orcid.org/0000-0002-9220-2739

  ⨯
• Oliver G. Pybus,

  Roles Conceptualization, Formal analysis, Investigation, Resources, Writing – review & editing

  Affiliation Department of Zoology, University of Oxford, Oxford, United Kingdom

  ⨯
• Daniel P. Carter,

  Roles Investigation, Software, Writing – review & editing

  Affiliation National Infection Service, Public Health England, Porton, United Kingdom

  https://orcid.org/0000-0002-8021-9277

  ⨯
• Steven T. Pullan,

  Roles Conceptualization, Investigation, Writing – review & editing

  Affiliation National Infection Service, Public Health England, Porton, United Kingdom

  ⨯
• Shevin T. Jacob,

  Roles Conceptualization, Writing – review & editing

  Affiliation Clinical Sciences, Liverpool School of Tropical Medicine, Liverpool, United Kingdom

  https://orcid.org/0000-0003-2425-9394

  ⨯
• Tajeldin Mohammedein Abdallah ,

  Roles Investigation, Project administration, Supervision, Writing – review & editing

  ¶‡ HB and MK share first authorship on this work. TMA, BG and TEF are joint senior authors on this work.

  Affiliations University of Kassala, Kassala, Sudan, Kassala Teaching Hospital, Kassala, Sudan

  ⨯
• Benedict Gannon ,

  Roles Conceptualization, Data curation, Investigation, Methodology, Resources, Supervision, Writing – review & editing

  ¶‡ HB and MK share first authorship on this work. TMA, BG and TEF are joint senior authors on this work.

  Affiliation UK Public Health Rapid Support Team, London School of Hygiene & Tropical Medicine/Public Health England, London, United Kingdom

  https://orcid.org/0000-0002-7260-3615

  ⨯
•  [ ... ],
• Tom E. Fletcher

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

  ¶‡ HB and MK share first authorship on this work. TMA, BG and TEF are joint senior authors on this work.

  Affiliation Clinical Sciences, Liverpool School of Tropical Medicine, Liverpool, United Kingdom

  https://orcid.org/0000-0002-3712-415X

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