Metagenomic sequencing reveals viral abundance and diversity in mosquitoes from the Shaanxi-Gansu-Ningxia region, China

Xiaozhou He; Qikai Yin; Liwei Zhou; Lei Meng; Weijun Hu; Fan Li; Yang Li; Kun Han; Shaobai Zhang; Shihong Fu; Xiaoshu Zhang; Ji Wang; Songtao Xu; Yi Zhang; Ying He; Maoxing Dong; Xinxin Shen; Zheng Zhang; Kai Nie; Guodong Liang; Xuejun Ma; Huanyu Wang

doi:10.1371/journal.pntd.0009381

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Open Access

Peer-reviewed

Research Article

Metagenomic sequencing reveals viral abundance and diversity in mosquitoes from the Shaanxi-Gansu-Ningxia region, China

Xiaozhou He ,

Contributed equally to this work with: Xiaozhou He, Qikai Yin, Liwei Zhou, Lei Meng, Weijun Hu

Roles Data curation, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

Affiliations NHC Key Laboratory of Medical Virology and Viral Diseases, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China, Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China

https://orcid.org/0000-0001-9292-5788

⨯
Qikai Yin ,

Contributed equally to this work with: Xiaozhou He, Qikai Yin, Liwei Zhou, Lei Meng, Weijun Hu

Roles Investigation, Resources, Validation, Writing – review & editing

Affiliations Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China, Department of Arboviruses, NHC Key Laboratory of Biosafety, National Institute for Viral Disease Control and Prevention, State Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China
⨯
Liwei Zhou ,

Contributed equally to this work with: Xiaozhou He, Qikai Yin, Liwei Zhou, Lei Meng, Weijun Hu

Roles Data curation, Investigation, Methodology, Resources

Affiliation Ningxia Hui Autonomous Region Center for Disease Control and Prevention, Yinchuan, People’s Republic of China
⨯
Lei Meng ,

Contributed equally to this work with: Xiaozhou He, Qikai Yin, Liwei Zhou, Lei Meng, Weijun Hu

Roles Data curation, Resources

Affiliation Gansu Provincial Center for Disease Control and Prevention, Lanzhou, People’s Republic of China
⨯
Weijun Hu ,

Contributed equally to this work with: Xiaozhou He, Qikai Yin, Liwei Zhou, Lei Meng, Weijun Hu

Roles Data curation, Resources

Affiliation Shaanxi Provincial Center for Disease Control and Prevention, Xi’an, People’s Republic of China
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Fan Li,

Roles Formal analysis, Funding acquisition, Methodology, Validation, Writing – review & editing

Affiliations Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China, Department of Arboviruses, NHC Key Laboratory of Biosafety, National Institute for Viral Disease Control and Prevention, State Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China
⨯
Yang Li,

Roles Software, Validation

Affiliations NHC Key Laboratory of Medical Virology and Viral Diseases, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China, Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China

https://orcid.org/0000-0001-8771-7044

⨯
Kun Han,

Roles Data curation, Resources

Affiliation Ningxia Hui Autonomous Region Center for Disease Control and Prevention, Yinchuan, People’s Republic of China
⨯
Shaobai Zhang,

Roles Investigation, Resources

Affiliation Shaanxi Provincial Center for Disease Control and Prevention, Xi’an, People’s Republic of China
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Shihong Fu,

Roles Investigation, Resources

Affiliations Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China, Department of Arboviruses, NHC Key Laboratory of Biosafety, National Institute for Viral Disease Control and Prevention, State Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China
⨯
Xiaoshu Zhang,

Roles Resources

Affiliation Gansu Provincial Center for Disease Control and Prevention, Lanzhou, People’s Republic of China
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Ji Wang,

Roles Software, Validation

Affiliations NHC Key Laboratory of Medical Virology and Viral Diseases, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China, Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China
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Songtao Xu,

Roles Writing – review & editing

Affiliations Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China, Department of Arboviruses, NHC Key Laboratory of Biosafety, National Institute for Viral Disease Control and Prevention, State Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China
⨯
Yi Zhang,

Roles Methodology

Affiliations NHC Key Laboratory of Medical Virology and Viral Diseases, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China, Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China
⨯
Ying He,

Roles Formal analysis

Affiliations Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China, Department of Arboviruses, NHC Key Laboratory of Biosafety, National Institute for Viral Disease Control and Prevention, State Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China
⨯
Maoxing Dong,

Roles Investigation, Resources

Affiliation Gansu Provincial Center for Disease Control and Prevention, Lanzhou, People’s Republic of China
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Xinxin Shen,

Roles Formal analysis, Validation

Affiliations NHC Key Laboratory of Medical Virology and Viral Diseases, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China, Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China
⨯
Zheng Zhang,

Roles Data curation, Resources

Affiliation Ningxia Hui Autonomous Region Center for Disease Control and Prevention, Yinchuan, People’s Republic of China
⨯
Kai Nie,

Roles Validation

Affiliations Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China, Department of Arboviruses, NHC Key Laboratory of Biosafety, National Institute for Viral Disease Control and Prevention, State Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China
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Guodong Liang,

Roles Conceptualization, Supervision

Affiliation Department of Arboviruses, NHC Key Laboratory of Biosafety, National Institute for Viral Disease Control and Prevention, State Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China
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Xuejun Ma ,

Roles Funding acquisition, Methodology, Project administration, Writing – review & editing

* E-mail: maxj@ivdc.chinacdc.cn (XJM); wanghy@ivdc.chinacdc.cn (HYW)

Affiliations NHC Key Laboratory of Medical Virology and Viral Diseases, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China, Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China
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[ ... ],
Huanyu Wang

Roles Data curation, Funding acquisition, Investigation, Supervision, Writing – review & editing

* E-mail: maxj@ivdc.chinacdc.cn (XJM); wanghy@ivdc.chinacdc.cn (HYW)

Affiliations Chinese Center for Disease Control and Prevention -Wuhan Institute of Virology, Chinese Academy of Sciences Joint Research Center for Emerging Infectious Diseases and Biosafety, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, People’s Republic of China, Department of Arboviruses, NHC Key Laboratory of Biosafety, National Institute for Viral Disease Control and Prevention, State Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China
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Metagenomic sequencing reveals viral abundance and diversity in mosquitoes from the Shaanxi-Gansu-Ningxia region, China

Xiaozhou He,
Qikai Yin,
Liwei Zhou,
Lei Meng,
Weijun Hu,
Fan Li,
Yang Li,
Kun Han,
Shaobai Zhang,
Shihong Fu

Published: April 26, 2021
https://doi.org/10.1371/journal.pntd.0009381

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