Comparative genomic and phenotypic characterization of invasive non-typhoidal Salmonella isolates from Siaya, Kenya

• Jessica Z. Kubicek-Sutherland ,

  Contributed equally to this work with: Jessica Z. Kubicek-Sutherland, Gary Xie

  Roles Data curation, Formal analysis, Methodology, Writing – original draft, Writing – review & editing

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0001-6215-4871

  ⨯
• Gary Xie ,

  Contributed equally to this work with: Jessica Z. Kubicek-Sutherland, Gary Xie

  Roles Data curation, Formal analysis, Methodology, Writing – review & editing

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0002-9176-924X

  ⨯
• Migun Shakya,

  Roles Data curation, Formal analysis, Methodology, Writing – review & editing

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0003-3876-691X

  ⨯
• Priya K. Dighe,

  Roles Methodology

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0002-3345-3394

  ⨯
• Lindsey L. Jacobs,

  Roles Data curation, Methodology

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  ⨯
• Hajnalka Daligault,

  Roles Formal analysis, Methodology

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0001-5937-9869

  ⨯
• Karen Davenport,

  Roles Methodology

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0002-2740-1344

  ⨯
• Loreen R. Stromberg,

  Roles Data curation, Writing – review & editing

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0003-1715-1211

  ⨯
• Zachary R. Stromberg,

  Roles Data curation, Writing – review & editing

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0002-1137-1128

  ⨯
• Qiuying Cheng,

  Roles Data curation, Methodology

  Affiliation Center for Global Health, University of New Mexico, Albuquerque, New Mexico, United States of America

  https://orcid.org/0000-0002-1343-1171

  ⨯
• Prakasha Kempaiah,

  Roles Data curation, Methodology

  Affiliation Center for Global Health, University of New Mexico, Albuquerque, New Mexico, United States of America

  https://orcid.org/0000-0002-2901-0339

  ⨯
• John Michael Ong’echa,

  Roles Data curation

  Affiliation University of New Mexico/KEMRI Laboratories of Parasitic and Viral Diseases, Kenya Medical Research Institute, Kisumu, Kenya

  https://orcid.org/0000-0003-3928-6774

  ⨯
• Vincent Otieno,

  Roles Data curation, Methodology

  Affiliation University of New Mexico/KEMRI Laboratories of Parasitic and Viral Diseases, Kenya Medical Research Institute, Kisumu, Kenya

  ⨯
• Evans Raballah,

  Roles Data curation, Writing – review & editing

  Affiliations University of New Mexico/KEMRI Laboratories of Parasitic and Viral Diseases, Kenya Medical Research Institute, Kisumu, Kenya, Department of Medical Laboratory Science, School of Public Health, Biomedical Sciences and Technology, Masinde Muliro University of Science and Technology, Kakamega, Kenya

  https://orcid.org/0000-0002-3304-6836

  ⨯
• Samuel Anyona,

  Roles Data curation, Formal analysis, Writing – review & editing

  Affiliations University of New Mexico/KEMRI Laboratories of Parasitic and Viral Diseases, Kenya Medical Research Institute, Kisumu, Kenya, Department of Medical Biochemistry, School of Medicine, Maseno University, Maseno, Kenya

  https://orcid.org/0000-0001-5813-4018

  ⨯
• Collins Ouma,

  Roles Investigation, Supervision, Writing – review & editing

  Affiliations University of New Mexico/KEMRI Laboratories of Parasitic and Viral Diseases, Kenya Medical Research Institute, Kisumu, Kenya, Department of Biomedical Sciences and Technology, School of Public Health and Community Development, Maseno University, Maseno, Kenya

  https://orcid.org/0000-0001-8205-8887

  ⨯
• Patrick S. G. Chain,

  Roles Data curation, Formal analysis, Supervision, Writing – review & editing

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0003-3949-3634

  ⨯
• Douglas J. Perkins,

  Roles Data curation, Formal analysis, Methodology, Supervision, Writing – original draft, Writing – review & editing

  Affiliations Center for Global Health, University of New Mexico, Albuquerque, New Mexico, United States of America, University of New Mexico/KEMRI Laboratories of Parasitic and Viral Diseases, Kenya Medical Research Institute, Kisumu, Kenya

  https://orcid.org/0000-0001-9390-6255

  ⨯
• Harshini Mukundan ,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Project administration, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: harshini@lanl.gov

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0002-0931-0545

  ⨯
• Benjamin H. McMahon,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Writing – original draft, Writing – review & editing

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  ⨯
•  [ ... ],
• Norman A. Doggett

  Roles Conceptualization, Data curation, Formal analysis, Methodology, Supervision, Writing – original draft

  Affiliation Los Alamos National Laboratory, Los Alamos, New Mexico, United States

  https://orcid.org/0000-0001-8254-2126

  ⨯
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