Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016

• Sadia Isfat Ara Rahman ,

  Contributed equally to this work with: Sadia Isfat Ara Rahman, Zoe A. Dyson

  Roles Conceptualization, Formal analysis, Methodology, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Infectious Diseases Division, International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh

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• Zoe A. Dyson ,

  Contributed equally to this work with: Sadia Isfat Ara Rahman, Zoe A. Dyson

  Roles Conceptualization, Formal analysis, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Department of Medicine, University of Cambridge, Cambridge, United Kingdom, Department of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Victoria, Australia, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom

  http://orcid.org/0000-0002-8887-3492

  ⨯
• Elizabeth J. Klemm,

  Roles Formal analysis, Visualization, Writing – review & editing

  Affiliation Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom

  ⨯
• Farhana Khanam,

  Roles Data curation, Funding acquisition, Resources, Writing – review & editing

  Affiliation Infectious Diseases Division, International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh

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• Kathryn E. Holt,

  Roles Formal analysis, Writing – review & editing

  Affiliations Department of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Victoria, Australia, Department of Infection Biology, Faculty of Infections and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, United Kingdom

  http://orcid.org/0000-0003-3949-2471

  ⨯
• Emran Kabir Chowdhury,

  Roles Supervision, Writing – review & editing

  Affiliation Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka, Bangladesh

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• Gordon Dougan ,

  Roles Conceptualization, Funding acquisition, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: gd312@medschl.cam.ac.uk

  ¶‡ These authors are joint senior authors on this work.

  Affiliations Department of Medicine, University of Cambridge, Cambridge, United Kingdom, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom

  ⨯
• Firdausi Qadri

  Roles Conceptualization, Funding acquisition, Supervision, Writing – original draft, Writing – review & editing

  ¶‡ These authors are joint senior authors on this work.

  Affiliation Infectious Diseases Division, International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh

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