Genome sequencing reveals coinfection by multiple chikungunya virus genotypes in a recent outbreak in Brazil

• Lais Ceschini Machado,

  Roles Formal analysis, Investigation, Writing – original draft

  Affiliation Department of Entomology, Oswaldo Cruz Foundation - Fiocruz, Aggeu Magalhães Institute - Recife, Pernambuco - Brazil

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• Mariana Carolina de Morais-Sobral,

  Roles Data curation, Formal analysis, Methodology

  Affiliation Department of Entomology, Oswaldo Cruz Foundation - Fiocruz, Aggeu Magalhães Institute - Recife, Pernambuco - Brazil

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• Tulio de Lima Campos,

  Roles Data curation, Formal analysis, Investigation, Software

  Affiliation Bioinformatics Core Facility, Aggeu Magalhães Institute (IAM), Oswaldo Cruz Foundation (FIOCRUZ), Recife Pernambuco, Brazil

  http://orcid.org/0000-0003-0446-848X

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• Mylena Ribeiro Pereira,

  Roles Data curation, Formal analysis

  Affiliation Department of Veterinary Medicine, Federal Rural University of Pernambuco – UFRPE, Recife, Brazil

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• Maria de Fátima Pessoa Militão de Albuquerque,

  Roles Data curation, Formal analysis, Investigation

  Affiliation Department of Public Health, Oswaldo Cruz Foundation - Fiocruz, Aggeu Magalhães Institute - Recife, Pernambuco - Brazil

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• Clément Gilbert,

  Roles Data curation, Formal analysis, Methodology, Writing – review & editing

  Affiliation Laboratoire Evolution, Génomes, Comportement, Ecologie, CNRS Université Paris-Sud UMR 9191, IRD UMR 247, Avenue de la Terrasse, Gif sur Yvette, France

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• Rafael Freitas Oliveira Franca ,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Methodology, Resources, Supervision, Validation, Writing – original draft, Writing – review & editing

  * E-mail: rafael.franca@cpqam.fiocruz.br (RFOF); gabriel.wallau@cpqam.fiocruz.br (GLW)

  ¶‡ These authors jointly conceived, conducted and supervised this work.

  Affiliation Department of Virology and Experimental Therapy, Oswaldo Cruz Foundation - Fiocruz, Aggeu Magalhães Institute - Recife, Pernambuco - Brazil

  http://orcid.org/0000-0002-1846-6007

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• Gabriel Luz Wallau

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: rafael.franca@cpqam.fiocruz.br (RFOF); gabriel.wallau@cpqam.fiocruz.br (GLW)

  ¶‡ These authors jointly conceived, conducted and supervised this work.

  Affiliation Department of Entomology, Oswaldo Cruz Foundation - Fiocruz, Aggeu Magalhães Institute - Recife, Pernambuco - Brazil

  http://orcid.org/0000-0002-1419-5713

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