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Web-based applications

miRandola: Extracellular Circulating MicroRNAs Database

Francesco Russo, Sebastiano Di Bella, Giovanni Nigita, Valentina Macca, Alessandro Laganà, Rosalba Giugno, Alfredo Pulvirenti, Alfredo Ferro

published 19 Oct 2012

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TRIP Database 2.0: A Manually Curated Information Hub for Accessing TRP Channel Interaction Network

Young-Cheul Shin, Soo-Yong Shin, Jung Nyeo Chun, Hyeon Sung Cho, Jin Muk Lim, Hong-Gee Kim, Insuk So, Dongseop Kwon, Ju-Hong Jeon

published 11 Oct 2012

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BioFET-SIM Web Interface: Implementation and Two Applications

Martin R. Hediger, Jan H. Jensen, Luca De Vico

published 08 Oct 2012

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A Public HTLV-1 Molecular Epidemiology Database for Sequence Management and Data Mining

Thessika Hialla Almeida Araujo, Leandro Inacio Souza-Brito, Pieter Libin, Koen Deforche, Dustin Edwards, Antonio Eduardo de Albuquerque-Junior, Anne-Mieke Vandamme, Bernardo Galvao-Castro, Luiz Carlos Junior Alcantara

published 10 Sep 2012

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CLEARPOND: Cross-Linguistic Easy-Access Resource for Phonological and Orthographic Neighborhood Densities

Viorica Marian, James Bartolotti, Sarah Chabal, Anthony Shook

published 20 Aug 2012

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Gene Expression Commons: An Open Platform for Absolute Gene Expression Profiling

Jun Seita, Debashis Sahoo, Derrick J. Rossi, Deepta Bhattacharya, Thomas Serwold, Matthew A. Inlay, Lauren I. R. Ehrlich, John W. Fathman, David L. Dill, Irving L. Weissman

published 18 Jul 2012

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TOLKIN – Tree of Life Knowledge and Information Network: Filling a Gap for Collaborative Research in Biological Systematics

Reed S. Beaman, Greg H. Traub, Christopher A. Dell, Nestor Santiago, Jin Koh, Nico Cellinese

published 18 Jun 2012

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PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies

Abhijit Aithal, Arun Sharma, Shilpy Joshi, Gajendra P. S. Raghava, Grish C. Varshney

published 11 Apr 2012

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microPIR: An Integrated Database of MicroRNA Target Sites within Human Promoter Sequences

Jittima Piriyapongsa, Chaiwat Bootchai, Chumpol Ngamphiw, Sissades Tongsima

published 16 Mar 2012

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iCanPlot: Visual Exploration of High-Throughput Omics Data Using Interactive Canvas Plotting

Amit U. Sinha, Scott A. Armstrong

published 29 Feb 2012

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Modeling the Adoption of Innovations in the Presence of Geographic and Media Influences

Jameson L. Toole, Meeyoung Cha, Marta C. González

published 19 Jan 2012

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miRConnect: Identifying Effector Genes of miRNAs and miRNA Families in Cancer Cells

Youjia Hua, Shiwei Duan, Andrea E. Murmann, Niels Larsen, Jørgen Kjems, Anders H. Lund, Marcus E. Peter

published 26 Oct 2011

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Exploiting Publicly Available Biological and Biochemical Information for the Discovery of Novel Short Linear Motifs

Ahmed Sayadi, Leonardo Briganti, Anna Tramontano, Allegra Via

published 20 Jul 2011

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