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Web-based applications

TOLKIN – Tree of Life Knowledge and Information Network: Filling a Gap for Collaborative Research in Biological Systematics

Reed S. Beaman, Greg H. Traub, Christopher A. Dell, Nestor Santiago, Jin Koh, Nico Cellinese

published 18 Jun 2012

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PolysacDB: A Database of Microbial Polysaccharide Antigens and Their Antibodies

Abhijit Aithal, Arun Sharma, Shilpy Joshi, Gajendra P. S. Raghava, Grish C. Varshney

published 11 Apr 2012

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microPIR: An Integrated Database of MicroRNA Target Sites within Human Promoter Sequences

Jittima Piriyapongsa, Chaiwat Bootchai, Chumpol Ngamphiw, Sissades Tongsima

published 16 Mar 2012

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iCanPlot: Visual Exploration of High-Throughput Omics Data Using Interactive Canvas Plotting

Amit U. Sinha, Scott A. Armstrong

published 29 Feb 2012

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Modeling the Adoption of Innovations in the Presence of Geographic and Media Influences

Jameson L. Toole, Meeyoung Cha, Marta C. González

published 19 Jan 2012

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miRConnect: Identifying Effector Genes of miRNAs and miRNA Families in Cancer Cells

Youjia Hua, Shiwei Duan, Andrea E. Murmann, Niels Larsen, Jørgen Kjems, Anders H. Lund, Marcus E. Peter

published 26 Oct 2011

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Exploiting Publicly Available Biological and Biochemical Information for the Discovery of Novel Short Linear Motifs

Ahmed Sayadi, Leonardo Briganti, Anna Tramontano, Allegra Via

published 20 Jul 2011

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ENZO: A Web Tool for Derivation and Evaluation of Kinetic Models of Enzyme Catalyzed Reactions

Staš Bevc, Janez Konc, Jure Stojan, Milan Hodošček, Matej Penca, Matej Praprotnik, Dušanka Janežič

published 19 Jul 2011

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GenExp: An Interactive Web-Based Genomic DAS Client with Client-Side Data Rendering

Bernat Gel Moreno, Xavier Messeguer Peypoch

published 05 Jul 2011

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PanSNPdb: The Pan-Asian SNP Genotyping Database

Chumpol Ngamphiw, Anunchai Assawamakin, Shuhua Xu, Philip J. Shaw, Jin Ok Yang, Ho Ghang, Jong Bhak, Edison Liu, Sissades Tongsima, and the HUGO Pan-Asian SNP Consortium

published 23 Jun 2011

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GOBO: Gene Expression-Based Outcome for Breast Cancer Online

Markus Ringnér, Erik Fredlund, Jari Häkkinen, Åke Borg, Johan Staaf

published 21 Mar 2011

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Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets

Robert Schmieder, Robert Edwards

published 09 Mar 2011

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TargetMine, an Integrated Data Warehouse for Candidate Gene Prioritisation and Target Discovery

Yi-An Chen, Lokesh P. Tripathi, Kenji Mizuguchi

published 08 Mar 2011

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