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Viral evolution

Phylodynamics of a regional SARS-CoV-2 rapid spreading event in Colorado in late 2020

Kristen J. Wade, Samantha Tisa, [ ... ], Olivia S. Rissland

Genomic characterization of SARS-CoV-2 from vaccine breakthrough cases in Allegheny County, Pennsylvania

Kady D. Waggle, Marissa P. Griffith, [ ... ], Jane W. Marsh

High activity of an affinity-matured ACE2 decoy against Omicron SARS-CoV-2 and pre-emergent coronaviruses

Joshua J. Sims, Sharon Lian, [ ... ], James M. Wilson

Covariance predicts conserved protein residue interactions important for the emergence and continued evolution of SARS-CoV-2 as a human pathogen

William P. Robins, John J. Mekalanos

Darwin’s tales–A content analysis of how evolution is presented in children’s books

Isabell K. Adler, Daniela Fiedler, Ute Harms

Vaccination and variants: Retrospective model for the evolution of Covid-19 in Italy

Annalisa Fierro, Silvio Romano, Antonella Liccardo

Genetic subtyping and phylogenetic analysis of HA and NA from avian influenza virus in wild birds from Peru reveals unique features among circulating strains in America

Gina R. Castro-Sanguinetti, Paulo Vitor Marques Simas, [ ... ], Maria Eliana Icochea

Unconstrained coevolution of bacterial size and the latent period of plastic phage

Juan A. Bonachela, Melinda Choua, Michael R. Heath

Deep phylogenetic-based clustering analysis uncovers new and shared mutations in SARS-CoV-2 variants as a result of directional and convergent evolution

Danilo Rosa Nunes, Carla Torres Braconi, [ ... ], Ricardo Durães-Carvalho

Analysis of temporal changes in HIV-1 CRF01_AE gag genetic variability and CD8 T-cell epitope evolution

Wardah Rafaqat, Uroosa Tariq, [ ... ], Syed Hani Abidi

Genetic characterization of upper respiratory tract virome from nonvaccinated Egyptian cow-calf operations

Abdou Nagy, Fatma Abdallah, [ ... ], Ibrahim Elsohaby

Consecutive deletions in a unique Uruguayan SARS-CoV-2 lineage evidence the genetic variability potential of accessory genes

Yanina Panzera, Lucía Calleros, [ ... ], Ruben Pérez

Genomic surveillance of SARS-CoV-2 Spike gene by sanger sequencing

Tiago Souza Salles, Andrea Cony Cavalcanti, [ ... ], Renata Campos Azevedo

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