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Viral evolution

Identification and genetic characterization of Jingmen tick virus from ticks sampled in select regions of Kenya; 2022–2024

Lydia Mwasi, Samoel Khamadi, [ ... ], Fredrick Eyase

Numerical investigation of a reaction-diffusion model used for rumor spreading in a ‘street’

Feiyun Pei, Yamin Du

Genomic evolution of SARS-CoV-2 delta variants pre- and post-omicron emergence using alignment-free machine learning models

Sathish Sankar, Kaushika Anandharaman, [ ... ], Esaki M. Shankar

Molecular characterization and phylogenetic analysis of major envelope protein gene (B2L) and ATPase protein gene (A32L) of orf virus isolates from goats in Southern, Thailand

Wongkae Watjiranon, Chya Vannakovida, [ ... ], Syriam Sooksawasdi Na Ayudhya

Whole-genome sequencing reveals a previously unrecognized measles virus cluster in Burundi

Néhémie Nzoyikorera, David F. Nieuwenhuijse, [ ... ], Bas B. Oude Munnink

A tale of SARS-CoV-2 genomic surveillance in Mali: Variants introductions and transmission dynamics

Noumou Yakhouba Keita, Harris Onywera, [ ... ], Ibrehima Guindo

Expanding diversity of tick-borne phleboviruses (Phlebovirus mukawaense, Mudanjiang phlebovirus, Gomselga Virus, and Onega tick phlebovirus) in Russia

Mikhail Y. Kartashov, Valentina Y. Kurushina, [ ... ], Anastasia V. Gladysheva

Genus- and host-associated codon usage bias patterns in coronavirus spike genes

Jia Jun Chew, Chong Han Ng

Dynamic transmission and evolutionary analysis of the HIV-1 subtype CRF01_AE pol region in Ningxia, China

Ziyang Luo, Wei Sun, [ ... ], Zhonglan Wu

Finite-time stability of the West Nile Virus model with Brownian motion

Kangkang Chang

Evaluating genetic diversity differences within a likelihood framework

David C. Nickle

A Darwinian model for the evolution of drug resistance to long-acting PrEP during an early HIV infection

Katharine Gurski, Yeona Kang, Yanping Ma

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