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Viral evolution

A Systematic Survey of Mini-Proteins in Bacteria and Archaea

Fengyu Wang, Jingfa Xiao, Linlin Pan, Ming Yang, Guoqiang Zhang, Shouguang Jin, Jun Yu

published 24 Dec 2008

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A Method for the Simultaneous Estimation of Selection Intensities in Overlapping Genes

Niv Sabath, Giddy Landan, Dan Graur

published 22 Dec 2008

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The Evolutionary Selective Advantage of HIV-1 Escape Variants and the Contribution of Escape to the HLA-Associated Risk of AIDS Progression

Becca Asquith

published 22 Oct 2008

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Comparison of Classifier Fusion Methods for Predicting Response to Anti HIV-1 Therapy

André Altmann, Michal Rosen-Zvi, Mattia Prosperi, Ehud Aharoni, Hani Neuvirth, Eugen Schülter, Joachim Büch, Daniel Struck, Yardena Peres, Francesca Incardona, Anders Sönnerborg, Rolf Kaiser, Maurizio Zazzi, Thomas Lengauer

published 21 Oct 2008

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HLA-Driven Convergence of HIV-1 Viral Subtypes B and F Toward the Adaptation to Immune Responses in Human Populations

Dario Alberto Dilernia, Leandro Jones, Sabrina Rodriguez, Gabriela Turk, Andrea E. Rubio, Sandra Pampuro, Manuel Gomez-Carrillo, Christian Bautista, Gabriel Deluchi, Jorge Benetucci, María Beatriz Lasala, Leonardo Lourtau, Marcelo Horacio Losso, Héctor Perez, Pedro Cahn, Horacio Salomón

published 21 Oct 2008

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Molecular Evolution of Human Immunodeficiency Virus Type 1 upon Transmission between Human Leukocyte Antigen Disparate Donor-Recipient Pairs

Marjon Navis, Diana Edo Matas, Andrea Rachinger, Fransje A. Koning, Peter van Swieten, Neeltje A. Kootstra, Hanneke Schuitemaker

published 18 Jun 2008

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Virus Adaptation by Manipulation of Host's Gene Expression

Patricia Agudelo-Romero, Pablo Carbonell, Miguel A. Perez-Amador, Santiago F. Elena

published 11 Jun 2008

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Hepatitis C Virus Diversity and Evolution in the Full Open-Reading Frame during Antiviral Therapy

Nathan A. Cannon, Maureen J. Donlin, Xiaofeng Fan, Rajeev Aurora, John E. Tavis, for the Virahep-C Study Group

published 07 May 2008

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Structure of the Scientific Community Modelling the Evolution of Resistance

REX Consortium

published 05 Dec 2007

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Adaptive Evolution of a Stress Response Protein

Tom J. Little, Lenny Nelson, Ted Hupp

published 10 Oct 2007

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Phylodynamics of HIV-1 in Lymphoid and Non-Lymphoid Tissues Reveals a Central Role for the Thymus in Emergence of CXCR4-Using Quasispecies

Marco Salemi, Brant R. Burkhardt, Rebecca R. Gray, Guity Ghaffari, John W. Sleasman, Maureen M. Goodenow

published 26 Sep 2007

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HIV-Specific Probabilistic Models of Protein Evolution

David C. Nickle, Laura Heath, Mark A. Jensen, Peter B. Gilbert, James I. Mullins, Sergei L. Kosakovsky Pond

published 06 Jun 2007

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Global Surveillance of Emerging Influenza Virus Genotypes by Mass Spectrometry

Rangarajan Sampath, Kevin L. Russell, Christian Massire, Mark W. Eshoo, Vanessa Harpin, Lawrence B. Blyn, Rachael Melton, Cristina Ivy, Thuy Pennella, Feng Li, Harold Levene, Thomas A. Hall, Brian Libby, Nancy Fan, Demetrius J. Walcott, Raymond Ranken, Michael Pear, Amy Schink, Jose Gutierrez, Jared Drader, David Moore, David Metzgar, Lynda Addington, Richard Rothman, Charlotte A. Gaydos, Samuel Yang, Kirsten St. George, Meghan E. Fuschino, Amy B. Dean, David E. Stallknecht, Ginger Goekjian, Samuel Yingst, Marshall Monteville, Magdi D. Saad, Chris A. Whitehouse, Carson Baldwin, Karl H. Rudnick, Steven A. Hofstadler, Stanley M. Lemon, David J. Ecker

published 30 May 2007

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