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Viral evolution

Antibody escape, the risk of serotype formation, and rapid immune waning: Modeling the implications of SARS-CoV-2 immune evasion

Catherine Albright, Debra Van Egeren, [ ... ], Madison Stoddard

Mutational networks of escape from transmitted HIV-1 infection

Elma H. Akand, Stephen J. Maher, John M. Murray

Not so unique to Primates: The independent adaptive evolution of TRIM5 in Lagomorpha lineage

Ana Águeda-Pinto, Ana Lemos de Matos, [ ... ], Pedro J. Esteves

Whole genome sequencing and molecular detection of potato virus X in Bangladesh

Md. Shafiqul Islam, Md. Akash Ahammed, [ ... ], Md. Mosharraf Hossain Molla

Tetherin downmodulation by SIVmac Nef lost with the H196Q escape variant is restored by an upstream variant

Blake Schouest, George J. Leslie, James A. Hoxie, Nicholas J. Maness

Genome characterization based on the Spike-614 and NS8-84 loci of SARS-CoV-2 reveals two major possible onsets of the COVID-19 pandemic

Xiaowen Hu, Yaojia Mu, [ ... ], Jiaming Zhang

Optimal age-specific vaccination control for COVID-19: An Irish case study

Eleni Zavrakli, Andrew Parnell, [ ... ], Subhrakanti Dey

Model based on COVID-19 evidence to predict and improve pandemic control

Rafael I. González, Pablo S. Moya, [ ... ], Miguel Kiwi

Whole-genome sequence analysis of SFTS bunyavirus in Huzhou, China

Deshun Xu, Lei Ji, Xiaofang Wu, Liping Chen

Molecular evidence for potential transovarial transmission of Dabieshan tick virus in Haemaphysalis longicornis from Shandong Province, China

Anan Wang, Yunfeng Tang, [ ... ], Guoyu Niu

Phylodynamics of a regional SARS-CoV-2 rapid spreading event in Colorado in late 2020

Kristen J. Wade, Samantha Tisa, [ ... ], Olivia S. Rissland

AutoPhy: Automated phylogenetic identification of novel protein subfamilies

Adrian N. Ortiz-Velez, Jeet Sukumaran, Ryin Rouzbehani, Scott T. Kelley

A deterministic compartmental model for the transition between variants in the spread of Covid-19 in Italy

Mario Saviano, Annalisa Fierro, Antonella Liccardo

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