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Viral evolution

HLA-Associated Immune Escape Pathways in HIV-1 Subtype B Gag, Pol and Nef Proteins

Zabrina L. Brumme, Mina John, [ ... ], Simon Mallal

The Evolution of the Major Hepatitis C Genotypes Correlates with Clinical Response to Interferon Therapy

Phillip S. Pang, Paul J. Planet, Jeffrey S. Glenn

Evolution and Phylogenetic Analysis of Full-Length VP3 Genes of Eastern Mediterranean Bluetongue Virus Isolates

Kyriaki Nomikou, Chrysostomos Ι. Dovas, [ ... ], Peter P. C. Mertens

Symbiotic Virus at the Evolutionary Intersection of Three Types of Large DNA Viruses; Iridoviruses, Ascoviruses, and Ichnoviruses

Yves Bigot, Sylvaine Renault, [ ... ], Brian A. Federici

Evolutionary Insights from a Genetically Divergent Hantavirus Harbored by the European Common Mole (Talpa europaea)

Hae Ji Kang, Shannon N. Bennett, [ ... ], Richard Yanagihara

Quantitative Deep Sequencing Reveals Dynamic HIV-1 Escape and Large Population Shifts during CCR5 Antagonist Therapy In Vivo

Athe M. N. Tsibris, Bette Korber, [ ... ], Daniel R. Kuritzkes

The G428A Nonsense Mutation in FUT2 Provides Strong but Not Absolute Protection against Symptomatic GII.4 Norovirus Infection

Beatrice Carlsson, Elin Kindberg, [ ... ], Lennart Svensson

Evolutionary Repercussions of Avian Culling on Host Resistance and Influenza Virulence

Eunha Shim, Alison P. Galvani

Conservation and Variability of West Nile Virus Proteins

Qi Ying Koo, Asif M. Khan, [ ... ], J. Thomas August

Conservation of Carbohydrate Binding Interfaces — Evidence of Human HBGA Selection in Norovirus Evolution

Ming Tan, Ming Xia, [ ... ], Xi Jiang

Genetic Diversity in the SIR Model of Pathogen Evolution

Isabel Gordo, M. Gabriela M. Gomes, Daniel G. Reis, Paulo R. A. Campos

A Systematic Survey of Mini-Proteins in Bacteria and Archaea

Fengyu Wang, Jingfa Xiao, [ ... ], Jun Yu

A Method for the Simultaneous Estimation of Selection Intensities in Overlapping Genes

Niv Sabath, Giddy Landan, Dan Graur

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