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Viral evolution

Transmission of Single and Multiple Viral Variants in Primary HIV-1 Subtype C Infection

Vladimir Novitsky, Rui Wang, Lauren Margolin, Jeannie Baca, Raabya Rossenkhan, Sikhulile Moyo, Erik van Widenfelt, M. Essex

published 09 Feb 2011

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Constrained Pattern of Viral Evolution in Acute and Early HCV Infection Limits Viral Plasticity

Katja Pfafferott, Silvana Gaudieri, Axel Ulsenheimer, Ian James, Malte Heeg, David Nolan, Mina John, Andri Rauch, Simon Mallal, Andrew Lucas, Paul Klenerman, Helmut M. Diepolder, Michaela Lucas

published 08 Feb 2011

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Dynamics of Molecular Evolution and Phylogeography of Barley yellow dwarf virus-PAV

Beilei Wu, Alexandra Blanchard-Letort, Yan Liu, Guanghe Zhou, Xifeng Wang, Santiago F. Elena

published 04 Feb 2011

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Within-Host Dynamics of the Hepatitis C Virus Quasispecies Population in HIV-1/HCV Coinfected Patients

Flavia Bernini, Erika Ebranati, Chiara De Maddalena, Renata Shkjezi, Laura Milazzo, Alessandra Lo Presti, Massimo Ciccozzi, Massimo Galli, Gianguglielmo Zehender

published 31 Jan 2011

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Proteotyping to Establish Gene Origin within Reassortant Influenza Viruses

Ji-won Ha, Alexander B. Schwahn, Kevin M. Downard

published 31 Jan 2011

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Dynamics of Viral Evolution and CTL Responses in HIV-1 Infection

Yi Liu, John P. McNevin, Sarah Holte, M. Juliana McElrath, James I. Mullins

published 20 Jan 2011

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Evolutionary and Structural Features of the C2, V3 and C3 Envelope Regions Underlying the Differences in HIV-1 and HIV-2 Biology and Infection

Helena Barroso, Pedro Borrego, Inês Bártolo, José Maria Marcelino, Carlos Família, Alexandre Quintas, Nuno Taveira

published 20 Jan 2011

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Taking Multiple Infections of Cells and Recombination into Account Leads to Small Within-Host Effective-Population-Size Estimates of HIV-1

Rajesh Balagam, Vasantika Singh, Aparna Raju Sagi, Narendra M. Dixit

published 13 Jan 2011

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Dynamics of Glycoprotein Charge in the Evolutionary History of Human Influenza

Nimalan Arinaminpathy, Bryan Grenfell

published 30 Dec 2010

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Evolutionary History and Population Dynamics of Hepatitis E Virus

Michael A. Purdy, Yury E. Khudyakov

published 17 Dec 2010

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The Threshold Bootstrap Clustering: A New Approach to Find Families or Transmission Clusters within Molecular Quasispecies

Mattia C. F. Prosperi, Andrea De Luca, Simona Di Giambenedetto, Laura Bracciale, Massimiliano Fabbiani, Roberto Cauda, Marco Salemi

published 25 Oct 2010

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Evolutionary Trajectory of White Spot Syndrome Virus (WSSV) Genome Shrinkage during Spread in Asia

Mark P. Zwart, Bui Thi Minh Dieu, Lia Hemerik, Just M. Vlak

published 14 Oct 2010

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Molecular Evolution of the Primate Antiviral Restriction Factor Tetherin

Jun Liu, Keping Chen, Jian-Hua Wang, Chiyu Zhang

published 30 Jul 2010

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