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Viral evolution

Genetic characterization of upper respiratory tract virome from nonvaccinated Egyptian cow-calf operations

Abdou Nagy, Fatma Abdallah, [ ... ], Ibrahim Elsohaby

Probing the compartmentalization of HIV-1 in the central nervous system through its neutralization properties

Karl Stefic, Antoine Chaillon, [ ... ], Francis Barin

A new resolution function to evaluate tree shape statistics

Maryam Hayati, Bita Shadgar, Leonid Chindelevitch

Clinical Determinants of HIV-1B Between-Host Evolution and their Association with Drug Resistance in Pediatric Patients

Israel Pagán, Patricia Rojas, José Tomás Ramos, África Holguín

High-Accuracy Identification of Incident HIV-1 Infections Using a Sequence Clustering Based Diversity Measure

Xia-Yu Xia, Meng Ge, [ ... ], Xian-Ming Pan

Isolation and Characterization of a Type 2 Vaccine-Derived Poliovirus from Environmental Surveillance in China, 2012

Zexin Tao, Yong Zhang, [ ... ], Wenbo Xu

Synonymous Codon Usage in TTSuV2: Analysis and Comparison with TTSuV1

Zhicheng Zhang, Wei Dai, Dingzhen Dai

Machine-learning a virus assembly fitness landscape

Pierre-Philippe Dechant, Yang-Hui He

Limited Evolution of Inferred HIV-1 Tropism while Viremia Is Undetectable during Standard HAART Therapy

Guinevere Q. Lee, Winnie Dong, [ ... ], P. Richard Harrigan

Molecular epidemiology of influenza B virus among hospitalized pediatric patients in Northern Italy during the 2015-16 season

Antonio Piralla, Giovanna Lunghi, [ ... ], Susanna Esposito

CD8 and CD4 Epitope Predictions in RV144: No Strong Evidence of a T-Cell Driven Sieve Effect in HIV-1 Breakthrough Sequences from Trial Participants

Kalpana Dommaraju, Gustavo Kijak, [ ... ], Morgane Rolland

Viral Kinetics Suggests a Reconciliation of the Disparate Observations of the Modulation of Claudin-1 Expression on Cells Exposed to Hepatitis C Virus

Pranesh Padmanabhan, Narendra M. Dixit

Evolutionary Invasion and Escape in the Presence of Deleterious Mutations

Claude Loverdo, James O. Lloyd-Smith

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