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Viral evolution

Computational Identification of Novel Amino-Acid Interactions in HIV Gag via Correlated Evolution

Olga V. Kalinina, Heike Oberwinkler, Bärbel Glass, Hans-Georg Kräusslich, Robert B. Russell, John A. G. Briggs

published 03 Aug 2012

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Discovery of Novel dsRNA Viral Sequences by In Silico Cloning and Implications for Viral Diversity, Host Range and Evolution

Huiquan Liu, Yanping Fu, Jiatao Xie, Jiasen Cheng, Said A. Ghabrial, Guoqing Li, Xianhong Yi, Daohong Jiang

published 27 Jul 2012

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Development of Elvitegravir Resistance and Linkage of Integrase Inhibitor Mutations with Protease and Reverse Transcriptase Resistance Mutations

Mark A. Winters, Robert M. Lloyd Jr., Robert W. Shafer, Michael J. Kozal, Michael D. Miller, Mark Holodniy

published 18 Jul 2012

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Compensatory Evolution of Net-Charge in Influenza A Virus Hemagglutinin

Yuki Kobayashi, Yoshiyuki Suzuki

published 12 Jul 2012

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Characterization of Bean Necrotic Mosaic Virus: A Member of a Novel Evolutionary Lineage within the Genus Tospovirus

Athos Silva de Oliveira, Fernando Lucas Melo, Alice Kazuko Inoue-Nagata, Tatsuya Nagata, Elliot Watanabe Kitajima, Renato Oliveira Resende

published 08 Jun 2012

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Analysis of C3 Suggests Three Periods of Positive Selection Events and Different Evolutionary Patterns between Fish and Mammals

Fanxing Meng, Yuena Sun, Xuezhu Liu, Jianxin Wang, Tianjun Xu, Rixin Wang

published 18 May 2012

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Using Knowledge Fusion to Analyze Avian Influenza H5N1 in East and Southeast Asia

Erjia Ge, Robert Haining, Chi Pang Li, Zuguo Yu, Miu Yee Waye, Ka Hou Chu, Yee Leung

published 17 May 2012

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Viral Diversity and Diversification of Major Non-Structural Genes vif, vpr, vpu, tat exon 1 and rev exon 1 during Primary HIV-1 Subtype C Infection

Raabya Rossenkhan, Vladimir Novitsky, Theresa K. Sebunya, Rosemary Musonda, Berhanu A. Gashe, M. Essex

published 09 May 2012

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Molecular Epidemiology and Evolution of Human Enterovirus Serotype 68 in Thailand, 2006–2011

Piyada Linsuwanon, Jiratchaya Puenpa, Kamol Suwannakarn, Vittawat Auksornkitti, Preeyaporn Vichiwattana, Sumeth Korkong, Apiradee Theamboonlers, Yong Poovorawan

published 07 May 2012

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Co-Evolution of Primate SAMHD1 and Lentivirus Vpx Leads to the Loss of the vpx Gene in HIV-1 Ancestor

Chiyu Zhang, Suresh de Silva, Jian-Hua Wang, Li Wu

published 04 May 2012

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Whole Genome Sequencing and Evolutionary Analysis of Human Papillomavirus Type 16 in Central China

Min Sun, Lei Gao, Ying Liu, Yiqiang Zhao, Xueqian Wang, Yaqi Pan, Tao Ning, Hong Cai, Haijun Yang, Weiwei Zhai, Yang Ke

published 04 May 2012

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Viral Kinetics Suggests a Reconciliation of the Disparate Observations of the Modulation of Claudin-1 Expression on Cells Exposed to Hepatitis C Virus

Pranesh Padmanabhan, Narendra M. Dixit

published 24 Apr 2012

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Evolutionary Dynamics Analysis of Human Metapneumovirus Subtype A2: Genetic Evidence for Its Dominant Epidemic

Jianguo Li, Lili Ren, Li Guo, Zichun Xiang, Gláucia Paranhos-Baccalà, Guy Vernet, Jianwei Wang

published 30 Mar 2012

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