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Viral evolution

Emergence and Phylodynamics of Citrus tristeza virus in Sicily, Italy

Salvatore Davino, Anouk Willemsen, Stefano Panno, Mario Davino, Antonino Catara, Santiago F. Elena, Luis Rubio

published 20 Jun 2013

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The Evolutionary Rates of HCV Estimated with Subtype 1a and 1b Sequences over the ORF Length and in Different Genomic Regions

Manqiong Yuan, Teng Lu, Chunhua Li, Ling Lu

published 06 Jun 2013

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Molecular Epidemiology and Phylodynamics of the Human Respiratory Syncytial Virus Fusion Protein in Northern Taiwan

Hsin Chi, Hsin-Fu Liu, Li-Chuan Weng, Nai-Yu Wang, Nan-Chang Chiu, Mei-Ju Lai, Yung-Cheng Lin, Yu-Ying Chiu, Wen-Shyang Hsieh, Li-Min Huang

published 29 May 2013

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Model-Selection-Based Approach for Calculating Cellular Multiplicity of Infection during Virus Colonization of Multi-Cellular Hosts

Mark P. Zwart, Nicolas Tromas, Santiago F. Elena

published 28 May 2013

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Dengue Virus Type 3 Adaptive Changes during Epidemics in São Jose de Rio Preto, Brazil, 2006–2007

Christian Julian Villabona-Arenas, Adriano Mondini, Irene Bosch, Diane Schimitt, Carlos E. Calzavara-Silva, Paolo M. de A Zanotto, Maurício L. Nogueira

published 07 May 2013

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Acute Phase CD8+ T Lymphocytes against Alternate Reading Frame Epitopes Select for Rapid Viral Escape during SIV Infection

Andrew D. Walsh, Benjamin N. Bimber, Arpita Das, Shari M. Piaskowski, Eva G. Rakasz, Alexander T. Bean, Philip A. Mudd, Adam J. Ericsen, Nancy A. Wilson, Austin L. Hughes, David H. O'Connor, Nicholas J. Maness

published 06 May 2013

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Novel Phylogenetic Algorithm to Monitor Human Tropism in Egyptian H5N1-HPAIV Reveals Evolution toward Efficient Human-to-Human Transmission

Vladimir R. Perovic, Claude P. Muller, Henry L. Niman, Nevena Veljkovic, Ursula Dietrich, Dusan D. Tosic, Sanja Glisic, Veljko Veljkovic

published 26 Apr 2013

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On Hepatitis C Virus Evolution: The Interaction between Virus and Host towards Treatment Outcome

Cíntia Bittar, Ana Carolina Gomes Jardim, Lilian Hiromi Tomonari Yamasaki, Claudia Márcia Aparecida Carareto, João Renato Rebello Pinho, Philippe Lemey, Isabel Maria Vicente Guedes de Carvalho-Mello, Paula Rahal

published 25 Apr 2013

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In Vitro HIV-1 Evolution in Response to Triple Reverse Transcriptase Inhibitors & In Silico Phenotypic Analysis

Barbara A. Rath, Kaveh Pouran Yousef, David K. Katzenstein, Robert W. Shafer, Christof Schütte, Max von Kleist, Thomas C. Merigan

published 17 Apr 2013

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Exploring the Molecular Epidemiology and Evolutionary Dynamics of Influenza A Virus in Taiwan

Jih-Hui Lin, Shu-Chun Chiu, Yung-Cheng Lin, Ju-Chien Cheng, Ho-Sheng Wu, Marco Salemi, Hsin-Fu Liu

published 16 Apr 2013

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Mean Protein Evolutionary Distance: A Method for Comparative Protein Evolution and Its Application

Michael J. Wise

published 15 Apr 2013

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Epidemiology and Evolution of Rotaviruses and Noroviruses from an Archival WHO Global Study in Children (1976–79) with Implications for Vaccine Design

Lauren A. Rackoff, Karin Bok, Kim Y. Green, Albert Z. Kapikian

published 25 Mar 2013

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Complete Genome Analysis of the C4 Subgenotype Strains of Enterovirus 71: Predominant Recombination C4 Viruses Persistently Circulating in China for 14 Years

Yan Zhang, Xiaojuan Tan, Aili Cui, Naiying Mao, Songtao Xu, Zhen Zhu, Jianhui Zhou, Jing Shi, Yueping Zhao, Xianjun Wang, Xueyong Huang, Shuangli Zhu, Yong Zhang, Wei Tang, Hua Ling, Wenbo Xu

published 18 Feb 2013

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