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Viral evolution

Application of Motif-Based Tools on Evolutionary Analysis of Multipartite Single-Stranded DNA Viruses

Hsiang-Iu Wang, Chih-Hung Chang, Po-Heng Lin, Hui-Chuan Fu, ChuanYi Tang, Hsin-Hung Yeh

published 06 Aug 2013

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Comprehensive Phylogenetic Reconstructions of African Swine Fever Virus: Proposal for a New Classification and Molecular Dating of the Virus

Vincent Michaud, Tantely Randriamparany, Emmanuel Albina

published 25 Jul 2013

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Evolutionary Invasion and Escape in the Presence of Deleterious Mutations

Claude Loverdo, James O. Lloyd-Smith

published 17 Jul 2013

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Bioinformatics of Recent Aqua- and Orthoreovirus Isolates from Fish: Evolutionary Gain or Loss of FAST and Fiber Proteins and Taxonomic Implications

Max L. Nibert, Roy Duncan

published 04 Jul 2013

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HIV-1 Clade B pol Evolution following Primary Infection

George K. Hightower, Susanne J. May, Josué Pérez-Santiago, Mary E. Pacold, Gabriel A. Wagner, Susan J. Little, Douglas D. Richman, Sanjay R. Mehta, Davey M. Smith, Sergei L. Kosakovsky Pond

published 28 Jun 2013

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Evolution of Type 2 Vaccine Derived Poliovirus Lineages. Evidence for Codon-Specific Positive Selection at Three Distinct Locations on Capsid Wall

Tapani Hovi, Carita Savolainen-Kopra, Teemu Smura, Soile Blomqvist, Haider Al-Hello, Merja Roivainen

published 28 Jun 2013

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Sequencing of the Hepatitis C Virus: A Systematic Review

Brendan Jacka, Francois Lamoury, Peter Simmonds, Gregory J. Dore, Jason Grebely, Tanya Applegate

published 27 Jun 2013

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An Experimental and Computational Evolution-Based Method to Study a Mode of Co-evolution of Overlapping Open Reading Frames in the AAV2 Viral Genome

Yasuhiro Kawano, Shane Neeley, Kei Adachi, Hiroyuki Nakai

published 24 Jun 2013

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Emergence and Phylodynamics of Citrus tristeza virus in Sicily, Italy

Salvatore Davino, Anouk Willemsen, Stefano Panno, Mario Davino, Antonino Catara, Santiago F. Elena, Luis Rubio

published 20 Jun 2013

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The Evolutionary Rates of HCV Estimated with Subtype 1a and 1b Sequences over the ORF Length and in Different Genomic Regions

Manqiong Yuan, Teng Lu, Chunhua Li, Ling Lu

published 06 Jun 2013

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Molecular Epidemiology and Phylodynamics of the Human Respiratory Syncytial Virus Fusion Protein in Northern Taiwan

Hsin Chi, Hsin-Fu Liu, Li-Chuan Weng, Nai-Yu Wang, Nan-Chang Chiu, Mei-Ju Lai, Yung-Cheng Lin, Yu-Ying Chiu, Wen-Shyang Hsieh, Li-Min Huang

published 29 May 2013

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Model-Selection-Based Approach for Calculating Cellular Multiplicity of Infection during Virus Colonization of Multi-Cellular Hosts

Mark P. Zwart, Nicolas Tromas, Santiago F. Elena

published 28 May 2013

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Dengue Virus Type 3 Adaptive Changes during Epidemics in São Jose de Rio Preto, Brazil, 2006–2007

Christian Julian Villabona-Arenas, Adriano Mondini, Irene Bosch, Diane Schimitt, Carlos E. Calzavara-Silva, Paolo M. de A Zanotto, Maurício L. Nogueira

published 07 May 2013

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