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Viral evolution

Microevolution and phylogenomic study of Respiratory Syncytial Virus type A

Ashfaq Ahmad, Sidra Majaz, Aamir Saeed, Shumaila Noreen, Muhammad Abbas, Bilal Khan, Hamid Ur Rahman, Faisal Nouroz, Yingqiu Xie, Abdur Rashid, Atta Ur Rehman

published 25 Feb 2025

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Whole-genome sequence analysis of SFTS bunyavirus in Huzhou, China

Deshun Xu, Lei Ji, Xiaofang Wu, Liping Chen

published 11 Feb 2025

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Characterization of West Nile virus Koutango lineage from phlebotomine sandflies in Kenya

Jane Wambui Thiiru, Solomon Langat, Francis Mulwa, Stephanie Cinkovich, Hellen Koka, Santos Yalwala, Samoel Khamadi, Justus Onguso, Nicholas Odemba, Francis Ngere, Jaree Johnson, Timothy Egbo, Eric Garges, Elly Ojwang, Fredrick Eyase

published 22 Aug 2024

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Research on the evolution of cross-platform online public opinion for public health emergencies considering stakeholders

Yan Shen, Zhou Luo, Xinping Song, Chunhua Liu

published 25 Jun 2024

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Analysis of a new negevirus-like sequence from Bemisia tabaci unveils a potential new taxon linking nelorpi- and centiviruses

Diego F. Quito-Avila, Edison Reyes-Proaño, Gerardo Armijos-Capa, Ricardo I. Alcalá Briseño, Robert Alvarez, Francisco F. Flores

published 16 May 2024

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Assessing the emergence time of SARS-CoV-2 zoonotic spillover

Stéphane Samson, Étienne Lord, Vladimir Makarenkov

published 04 Apr 2024

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The weekly P25 of the age of the influenza-like illness shows a higher correlation with COVID-19 mortality than rapid tests and could predict the evolution of COVID-19 pandemics in sentinel surveillance, Piura, Perú, 2021

Víctor Raúl Ocaña Gutiérrez, Rodolfo Arturo González Ramírez, Víctor Alexander Ocaña Aguilar, Nadia Gabriela Ocaña Aguilar, Carlos Enrique Holguín Mauricci

published 07 Mar 2024

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AutoPhy: Automated phylogenetic identification of novel protein subfamilies

Adrian N. Ortiz-Velez, Jeet Sukumaran, Ryin Rouzbehani, Scott T. Kelley

published 11 Jan 2024

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Molecular evidence for potential transovarial transmission of Dabieshan tick virus in Haemaphysalis longicornis from Shandong Province, China

Anan Wang, Yunfeng Tang, Zheng Pang, Yaxuan Gong, Jintao Wu, Jun Qi, Guoyu Niu

published 22 Dec 2023

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A deterministic compartmental model for the transition between variants in the spread of Covid-19 in Italy

Mario Saviano, Annalisa Fierro, Antonella Liccardo

published 14 Nov 2023

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Antibody escape, the risk of serotype formation, and rapid immune waning: Modeling the implications of SARS-CoV-2 immune evasion

Catherine Albright, Debra Van Egeren, Aditya Thakur, Arijit Chakravarty, Laura F. White, Madison Stoddard

published 18 Oct 2023

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Assessment of positive selection across SARS-CoV-2 variants via maximum likelihood

Carly Middleton, Laura Kubatko

published 14 Sep 2023

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Optimal age-specific vaccination control for COVID-19: An Irish case study

Eleni Zavrakli, Andrew Parnell, David Malone, Ken Duffy, Subhrakanti Dey

published 05 Sep 2023

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